ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11426427	pyruvate decarboxylase 2
mtr-r.5	11426427	pyruvate decarboxylase 2
mtr-m.5	11426427	pyruvate decarboxylase 2
mtr-u.5	11413068	pyruvate decarboxylase 2
mtr-u.5	11436410	pyruvate decarboxylase 2
gma-u.5	100787315	pyruvate decarboxylase 2
gma-u.5	100809553	pyruvate decarboxylase 1
gma-u.5	100782747	pyruvate decarboxylase 2
ppo-u.5	7460369	pyruvate decarboxylase 2
ppo-u.5	7468064	pyruvate decarboxylase 2
ppo-u.5	7472319	pyruvate decarboxylase 1
ath-u.5	PDC2	pyruvate decarboxylase-2
ath-u.5	PDC3	pyruvate decarboxylase-3
vvi-u.5	100267272	pyruvate decarboxylase 1
vvi-u.5	100242845	pyruvate decarboxylase-2-like
vvi-u.5	100232858	pyruvate decarboxylase 2
sly-u.5	101256911	pyruvate decarboxylase 1
sly-u.5	101246495	pyruvate decarboxylase 1
sly-u.5	101247173	pyruvate decarboxylase 1-like
osa-u.5	4339068	pyruvate decarboxylase 1
osa-u.5	4344382	pyruvate decarboxylase 3-like
osa-u.5	4324066	pyruvate decarboxylase 2
zma-u.5	103634444	pyruvate decarboxylase 3
zma-u.5	542651	pyruvate decarboxylase
zma-u.5	542376	pyruvate decarboxylase 1

Top 50 coexpressed genes to 11426427 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11426427 (mtr-u.5 coexpression data)

CoexMap"11426427"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr00010 [list] [network] Glycolysis / Gluconeogenesis (138 genes)

GO BP

GO:0000949 [list] [network] aromatic amino acid family catabolic process to alcohol via Ehrlich pathway

(6 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(784 genes)

IEA

GO MF

GO:0004737 [list] [network] pyruvate decarboxylase activity	(6 genes)	IEA
GO:0030976 [list] [network] thiamine pyrophosphate binding	(13 genes)	IEA
GO:0000287 [list] [network] magnesium ion binding	(164 genes)	IEA

Protein

XP_024626263.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, plas 2, E.R. 2, E.R._plas 2

(predict for XP_024626263.2)

Subcellular
localization
TargetP

other 7, chlo 4

(predict for XP_024626263.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11426427	mtr-r.5 for 11426427	mtr-m.5 for 11426427	mtr-u.5 for 11413068	mtr-u.5 for 11436410	gma-u.5 for 100787315	gma-u.5 for 100809553	gma-u.5 for 100782747	ppo-u.5 for 7460369	ppo-u.5 for 7468064	ppo-u.5 for 7472319	ath-u.5 for PDC2	ath-u.5 for PDC3	vvi-u.5 for 100267272	vvi-u.5 for 100242845	vvi-u.5 for 100232858	sly-u.5 for 101256911	sly-u.5 for 101246495	sly-u.5 for 101247173	osa-u.5 for 4339068	osa-u.5 for 4344382	osa-u.5 for 4324066	zma-u.5 for 103634444	zma-u.5 for 542651	zma-u.5 for 542376

Ortholog

Ortholog ID: 1024

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PDC2

Function^*

pyruvate decarboxylase 2

pyruvate decarboxylase 1

pyruvate decarboxylase 2

pyruvate decarboxylase-2

Thiamine pyrophosphate dependent pyruvate decarboxylase family protein

pyruvate decarboxylase 2

pyruvate decarboxylase 4

pyruvate decarboxylase 1

pyruvate decarboxylase 2

pyruvate decarboxylase 1-like

pyruvate decarboxylase

pyruvate decarboxylase 2

pyruvate decarboxylase 1

pyruvate decarboxylase 1-like

pyruvate decarboxylase 1

pyruvate decarboxylase 1-like

pyruvate decarboxylase 3-like

pyruvate decarboxylase 1-like

pyruvate decarboxylase 3

pyruvate decarboxylase 1

pyruvate decarboxylase 2-like

pyruvate decarboxylase 2

pyruvate decarboxylase 1

pyruvate decarboxylase 2

pyruvate decarboxylase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	9
mtr00071	Fatty acid degradation	3
mtr00350	Tyrosine metabolism	3
mtr00592	alpha-Linolenic acid metabolism	3
mtr00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	10
mtr00071	Fatty acid degradation	3
mtr00350	Tyrosine metabolism	3
mtr00592	alpha-Linolenic acid metabolism	3
mtr00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	17
gma01200	Carbon metabolism	11
gma01230	Biosynthesis of amino acids	10
gma00620	Pyruvate metabolism	7
gma00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	12
gma01200	Carbon metabolism	7
gma00620	Pyruvate metabolism	5
gma01230	Biosynthesis of amino acids	5
gma00030	Pentose phosphate pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	9
ppo01200	Carbon metabolism	7
ppo01230	Biosynthesis of amino acids	7
ppo00710	Carbon fixation by Calvin cycle	4
ppo00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01212	Fatty acid metabolism	4
ppo00062	Fatty acid elongation	3
ppo01040	Biosynthesis of unsaturated fatty acids	3
ppo00410	beta-Alanine metabolism	2
ppo00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00010	Glycolysis / Gluconeogenesis	4
ath00620	Pyruvate metabolism	3
ath01200	Carbon metabolism	3
ath01230	Biosynthesis of amino acids	3
ath00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	5
bra00051	Fructose and mannose metabolism	4
bra01200	Carbon metabolism	4
bra01230	Biosynthesis of amino acids	4
bra00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	4
vvi01200	Carbon metabolism	4
vvi01210	2-Oxocarboxylic acid metabolism	4
vvi00020	Citrate cycle (TCA cycle)	3
vvi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	8
vvi01200	Carbon metabolism	4
vvi01230	Biosynthesis of amino acids	4
vvi00620	Pyruvate metabolism	3
vvi00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	5
bna00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	5
bna00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	9
cit01200	Carbon metabolism	6
cit01230	Biosynthesis of amino acids	6
cit00710	Carbon fixation by Calvin cycle	5
cit00350	Tyrosine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	10
cit01200	Carbon metabolism	7
cit01230	Biosynthesis of amino acids	6
cit00710	Carbon fixation by Calvin cycle	5
cit00350	Tyrosine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	5
sly00030	Pentose phosphate pathway	2
sly00051	Fructose and mannose metabolism	2
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	4
sly00350	Tyrosine metabolism	2
sly00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	3
sot00480	Glutathione metabolism	2
sot00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta00071	Fatty acid degradation	2
nta00350	Tyrosine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	6
nta00350	Tyrosine metabolism	4
nta00220	Arginine biosynthesis	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	3
osa01200	Carbon metabolism	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	9
zma00620	Pyruvate metabolism	4
zma00270	Cysteine and methionine metabolism	2
zma00071	Fatty acid degradation	2
zma00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	6
tae01200	Carbon metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00710	Carbon fixation by Calvin cycle	4
tae00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	3
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	5
sbi00071	Fatty acid degradation	2
sbi00350	Tyrosine metabolism	2
sbi00592	alpha-Linolenic acid metabolism	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	8
bdi01200	Carbon metabolism	5
bdi01230	Biosynthesis of amino acids	5
bdi00620	Pyruvate metabolism	4
bdi00350	Tyrosine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	10
cre00020	Citrate cycle (TCA cycle)	9
cre01210	2-Oxocarboxylic acid metabolism	4
cre00190	Oxidative phosphorylation	3
cre00785	Lipoic acid metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

11413068

11436410

100789053

100809553

7460369

7468064

835587

829444

103844946

103850424

100267272

100232858

107890944

107890945

106435877

125592871

102577973

102618817

101246495

101247173

102594081

107772935

107766552

4344382

4339066

103634444

542376

123077383

123077387

123429379

123448899

8075118

8076982

100828933

100821811

5729032

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	2	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11426427 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11426427 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**