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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11428939   ubiquitin carboxyl-terminal hydrolase 27 
 mtr-r.5   11428939   ubiquitin carboxyl-terminal hydrolase 27 
 mtr-m.5   11428939   ubiquitin carboxyl-terminal hydrolase 27 
 gma-u.5   100813815   ubiquitin carboxyl-terminal hydrolase 27 
 gma-u.5   100802492   ubiquitin carboxyl-terminal hydrolase 27 
 ppo-u.5   7456283   ubiquitin carboxyl-terminal hydrolase 27 
 ath-u.5   UBP27   ubiquitin-specific protease 27 
 vvi-u.5   100266433   ubiquitin carboxyl-terminal hydrolase 27 
 sly-u.5   101263107   ubiquitin carboxyl-terminal hydrolase 27 
 osa-u.5   9266560   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   103651463   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   103633186   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   100193497   Ubiquitin carboxyl-terminal hydrolase 

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Top 50 coexpressed genes to 11428939 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11428939 (mtr-u.5 coexpression data)

CoexMap"11428939"


mtrLOC11428939 | Entrez gene ID : 11428939      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (75 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (784 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (60 genes)  IEA  
Protein XP_003630151.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_003630151.2)
Subcellular
localization
TargetP
mito 4  (predict for XP_003630151.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11428939
mtr-r.5
for
11428939
mtr-m.5
for
11428939
gma-u.5
for
100813815
gma-u.5
for
100802492
ppo-u.5
for
7456283
ath-u.5
for
UBP27
vvi-u.5
for
100266433
sly-u.5
for
101263107
osa-u.5
for
9266560
zma-u.5
for
103651463
zma-u.5
for
103633186
zma-u.5
for
100193497


Ortholog ID: 9069
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC11428939 LOC100802492 LOC100813815 LOC7456283 UBP27 LOC103835125 LOC100266433 LOC107919890 LOC107912924 LOC106381983 LOC106361504 LOC102608942 LOC101263107 LOC102603427 LOC107825716 LOC107765225 LOC9266560 LOC103633186 LOC103651463 LOC123053313 LOC123045468 LOC123426725 LOC8073997 LOC100826818
Function* ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin-specific protease 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27-like ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27-like ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03083 Polycomb repressive complex 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00790 Folate biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03083 Polycomb repressive complex 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00770 Pantothenate and CoA biosynthesis 2
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11428939 100802492 100813815 7456283 830092 103835125 100266433 107919890 107912924 106381983 106361504 102608942 101263107 102603427 107825716 107765225 9266560 103633186 103651463 123053313 123045468 123426725 8073997 100826818
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