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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11429342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 mtr-r.5   11429342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 mtr-m.5   11429342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 gma-u.5   100790141   uncharacterized LOC100790141 
 gma-u.5   100818459   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 ppo-u.5   7470544   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 ath-u.5   PIFI   post-illumination chlorophyll fluorescence increase 
 vvi-u.5   PIFI   chloroplast post-illumination chlorophyll fluorescence increase protein 
 sly-u.5   101260209   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 osa-u.5   4333342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 zma-u.5   100037827   chloroplast post-illumination chlorophyll fluorescence increase protein 
 zma-u.5   100272863   uncharacterized LOC100272863 

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Top 50 coexpressed genes to 11429342 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11429342 (mtr-u.5 coexpression data)

CoexMap"11429342"


mtrLOC11429342 | Entrez gene ID : 11429342      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010478 [list] [network] chlororespiration  (1 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (100 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (184 genes)  IEA  
GO MF
Protein XP_003604373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003604373.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003604373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11429342

.
mtr-r.5
for
11429342

.
mtr-m.5
for
11429342

.
gma-u.5
for
100790141

.
gma-u.5
for
100818459

.
ppo-u.5
for
7470544

.
ath-u.5
for
PIFI

.
vvi-u.5
for
PIFI

.
sly-u.5
for
101260209

.
osa-u.5
for
4333342

.
zma-u.5
for
100037827

.
zma-u.5
for
100272863

.


Ortholog ID: 8006
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PIFI LOC100818459 LOC100790141 LOC101260209 LOC4333342 LOC100037827 LOC100272863 LOC103869869 LOC103859641 PIFI LOC7470544 LOC11429342 LOC123148288 LOC123166369 LOC123412505 LOC107937380 LOC121230813 BNAC03G39300D LOC106402347 LOC8064544 LOC102579625 LOC102621225 LOC100845363 LOC107791394 LOC107830728
Function* post-illumination chlorophyll fluorescence increase protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC100790141 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic chloroplast post-illumination chlorophyll fluorescence increase protein uncharacterized LOC100272863 uncharacterized LOC103869869 uncharacterized LOC103859641 chloroplast post-illumination chlorophyll fluorescence increase protein protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC8064544 uncharacterized LOC102579625 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC100845363 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC107830728
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00730 Thiamine metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot01200 Carbon metabolism 5
sot00710 Carbon fixation by Calvin cycle 3
sot00260 Glycine, serine and threonine metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820827 100818459 100790141 101260209 4333342 100037827 100272863 103869869 103859641 100264489 7470544 11429342 123148288 123166369 123412505 107937380 121230813 106406162 106402347 8064544 102579625 102621225 100845363 107791394 107830728
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