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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11432602   ribosomal RNA small subunit methyltransferase, chloroplastic 
 mtr-r.5   11432602   ribosomal RNA small subunit methyltransferase, chloroplastic 
 mtr-m.5   11432602   ribosomal RNA small subunit methyltransferase, chloroplastic 
 gma-u.5   100790726   ribosomal RNA small subunit methyltransferase, chloroplastic 
 gma-u.5   100780381   ribosomal RNA small subunit methyltransferase, chloroplastic 
 ppo-u.5   7464904   ribosomal RNA small subunit methyltransferase, chloroplastic 
 ath-u.5   PFC1   Ribosomal RNA adenine dimethylase family protein 
 vvi-u.5   100264412   ribosomal RNA small subunit methyltransferase, chloroplastic 
 sly-u.5   101258502   ribosomal RNA small subunit methyltransferase, chloroplastic 
 osa-u.5   9271200   ribosomal RNA small subunit methyltransferase, chloroplastic 
 zma-u.5   100285018   uncharacterized LOC100285018 

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Top 50 coexpressed genes to 11432602 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11432602 (mtr-u.5 coexpression data)

CoexMap"11432602"


mtrLOC11432602 | Entrez gene ID : 11432602      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031167 [list] [network] rRNA methylation  (29 genes)  IEA  
GO CC
GO MF
GO:0000179 [list] [network] rRNA (adenine-N6,N6-)-dimethyltransferase activity  (4 genes)  IEA  
Protein XP_003623846.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003623846.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003623846.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11432602
mtr-r.5
for
11432602
mtr-m.5
for
11432602
gma-u.5
for
100790726
gma-u.5
for
100780381
ppo-u.5
for
7464904
ath-u.5
for
PFC1
vvi-u.5
for
100264412
sly-u.5
for
101258502
osa-u.5
for
9271200
zma-u.5
for
100285018


Ortholog ID: 10480
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC11432602 LOC100780381 LOC100790726 LOC7464904 PFC1 LOC103843813 LOC100264412 LOC107911943 LOC107960552 LOC106434179 LOC106426082 LOC102623217 LOC101258502 LOC102595371 LOC107801651 LOC107796843 LOC9271200 LOC100285018 LOC123135839 LOC123143364 LOC123401918 LOC8068269 LOC100842973 CHLRE_06g309300v5
Function* ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic Ribosomal RNA adenine dimethylase family protein ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic-like ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic-like ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic uncharacterized LOC100285018 ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic ribosomal RNA small subunit methyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11432602 100780381 100790726 7464904 839283 103843813 100264412 107911943 107960552 106434179 106426082 102623217 101258502 102595371 107801651 107796843 9271200 100285018 123135839 123143364 123401918 8068269 100842973 5716827
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