ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11433563	heterogeneous nuclear ribonucleoprotein Q
mtr-r.5	11433563	heterogeneous nuclear ribonucleoprotein Q
mtr-m.5	11433563	heterogeneous nuclear ribonucleoprotein Q
mtr-u.5	25492284	heterogeneous nuclear ribonucleoprotein Q
mtr-u.5	11423198	heterogeneous nuclear ribonucleoprotein Q
mtr-u.5	11410526	heterogeneous nuclear ribonucleoprotein Q
gma-u.5	100785076	heterogeneous nuclear ribonucleoprotein Q
gma-u.5	100790907	heterogeneous nuclear ribonucleoprotein Q
gma-u.5	100798476	heterogeneous nuclear ribonucleoprotein Q
ppo-u.5	7455357	heterogeneous nuclear ribonucleoprotein Q
ppo-u.5	7492252	heterogeneous nuclear ribonucleoprotein Q
ppo-u.5	7460062	heterogeneous nuclear ribonucleoprotein Q
ath-u.5	AT3G52660	RNA-binding (RRM/RBD/RNP motifs) family protein
ath-u.5	LIF2	RNA-binding (RRM/RBD/RNP motifs) family protein
ath-u.5	AT5G28390	RNA-binding (RRM/RBD/RNP motifs) family protein
vvi-u.5	100241942	heterogeneous nuclear ribonucleoprotein Q
vvi-u.5	100267377	heterogeneous nuclear ribonucleoprotein Q
vvi-u.5	100259599	heterogeneous nuclear ribonucleoprotein Q
sly-u.5	101253016	heterogeneous nuclear ribonucleoprotein Q
sly-u.5	101268517	heterogeneous nuclear ribonucleoprotein Q
osa-u.5	4350209	heterogeneous nuclear ribonucleoprotein Q
osa-u.5	4351445	heterogeneous nuclear ribonucleoprotein Q
osa-u.5	4348127	heterogeneous nuclear ribonucleoprotein Q
zma-u.5	103640663	heterogeneous nuclear ribonucleoprotein Q
zma-u.5	100191663	uncharacterized LOC100191663
zma-u.5	100279765	uncharacterized LOC100279765

Top 50 coexpressed genes to 11433563 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11433563 (mtr-u.5 coexpression data)

CoexMap"11433563"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1400 genes)

IEA

Protein

XP_003625838.1 [sequence] [blastp]
XP_024625496.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_003625838.1)
nucl 10	(predict for XP_024625496.1)

Subcellular
localization
TargetP

other 7	(predict for XP_003625838.1)
other 7	(predict for XP_024625496.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11433563	mtr-r.5 for 11433563	mtr-m.5 for 11433563	mtr-u.5 for 25492284	mtr-u.5 for 11423198	mtr-u.5 for 11410526	gma-u.5 for 100785076	gma-u.5 for 100790907	gma-u.5 for 100798476	ppo-u.5 for 7455357	ppo-u.5 for 7492252	ppo-u.5 for 7460062	ath-u.5 for AT3G52660	ath-u.5 for LIF2	ath-u.5 for AT5G28390	vvi-u.5 for 100241942	vvi-u.5 for 100267377	vvi-u.5 for 100259599	sly-u.5 for 101253016	sly-u.5 for 101268517	osa-u.5 for 4350209	osa-u.5 for 4351445	osa-u.5 for 4348127	zma-u.5 for 103640663	zma-u.5 for 100191663	zma-u.5 for 100279765

Ortholog

Ortholog ID: 1709

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LIF2

Function^*