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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11435290   formamidopyrimidine-DNA glycosylase 
 mtr-r.5   11435290   formamidopyrimidine-DNA glycosylase 
 mtr-m.5   11435290   formamidopyrimidine-DNA glycosylase 
 gma-u.5   100806161   formamidopyrimidine-DNA glycosylase 
 ppo-u.5   18096694   formamidopyrimidine-DNA glycosylase 
 ath-u.5   MMH-1   MUTM homolog-1 
 vvi-u.5   100261209   formamidopyrimidine-DNA glycosylase 
 vvi-u.5   100258664   formamidopyrimidine-DNA glycosylase 
 sly-u.5   101258844   formamidopyrimidine-DNA glycosylase 
 osa-u.5   4341640   formamidopyrimidine-DNA glycosylase 
 osa-u.5   4345225   formamidopyrimidine-DNA glycosylase 
 zma-u.5   100273102   uncharacterized LOC100273102 

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Top 50 coexpressed genes to 11435290 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11435290 (mtr-u.5 coexpression data)

CoexMap"11435290"


mtrLOC11435290 | Entrez gene ID : 11435290      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03410 [list] [network] Base excision repair (55 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (32 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0008534 [list] [network] oxidized purine nucleobase lesion DNA N-glycosylase activity  (3 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (8 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (35 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
Protein XP_003597926.2 [sequence] [blastp]
XP_024631712.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003597926.2)
nucl 10  (predict for XP_024631712.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003597926.2)
other 8  (predict for XP_024631712.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11435290

.
mtr-r.5
for
11435290

.
mtr-m.5
for
11435290

.
gma-u.5
for
100806161

.
ppo-u.5
for
18096694

.
ath-u.5
for
MMH-1

.
vvi-u.5
for
100261209

.
vvi-u.5
for
100258664

.
sly-u.5
for
101258844

.
osa-u.5
for
4341640

.
osa-u.5
for
4345225

.
zma-u.5
for
100273102

.


Ortholog ID: 7072
Species ath gma sly osa osa zma bra vvi vvi ppo mtr tae tae hvu hvu ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol MMH-1 LOC100806161 LOC101258844 LOC4341640 LOC4345225 LOC100273102 LOC103868500 LOC100261209 LOC100258664 LOC18096694 LOC11435290 LOC123051038 LOC123186976 LOC123410483 LOC123424347 LOC107914186 LOC106445720 LOC106406040 CHLRE_10g428433v5 LOC8058397 LOC110437057 LOC102584467 LOC102621076 LOC100825943 LOC100833637 LOC107824922 LOC107790249
Function* MUTM homolog-1 formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase uncharacterized LOC100273102 formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase uncharacterized protein formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03410 Base excision repair 5
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 2
vvi03013 Nucleocytoplasmic transport 2
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 4
sot03008 Ribosome biogenesis in eukaryotes 2
sot03030 DNA replication 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00260 Glycine, serine and threonine metabolism 3
bdi00270 Cysteine and methionine metabolism 3
bdi01200 Carbon metabolism 3
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841681 100806161 101258844 4341640 4345225 100273102 103868500 100261209 100258664 18096694 11435290 123051038 123186976 123410483 123424347 107914186 106445720 106406040 5728140 8058397 110437057 102584467 102621076 100825943 100833637 107824922 107790249
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