ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11437254	ATP-dependent DNA helicase At3g02060, chloroplastic
mtr-r.5	11437254	ATP-dependent DNA helicase At3g02060, chloroplastic
mtr-m.5	11437254	ATP-dependent DNA helicase At3g02060, chloroplastic
gma-u.5	100805206	ATP-dependent DNA helicase At3g02060, chloroplastic
gma-u.5	100791900	ATP-dependent DNA helicase At3g02060, chloroplastic
ppo-u.5	7462386	ATP-dependent DNA helicase At3g02060, chloroplastic
ppo-u.5	7466312	ATP-dependent DNA helicase At3g02060, chloroplastic
ath-u.5	AT3G02060	DEAD/DEAH box helicase
vvi-u.5	100251594	ATP-dependent DNA helicase At3g02060, chloroplastic
sly-u.5	101256820	putative ATP-dependent DNA helicase
osa-u.5	4350646	ATP-dependent DNA helicase At3g02060, chloroplastic
zma-u.5	103648038	ATP-dependent DNA helicase chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005524 [list] [network] ATP binding	(2502 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(4267 genes)	IEA

Protein

XP_024626501.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 4

(predict for XP_024626501.1)

Subcellular
localization
TargetP

chlo 4, other 3

(predict for XP_024626501.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11437254	mtr-r.5 for 11437254	mtr-m.5 for 11437254	gma-u.5 for 100805206	gma-u.5 for 100791900	ppo-u.5 for 7462386	ppo-u.5 for 7466312	ath-u.5 for AT3G02060	vvi-u.5 for 100251594	sly-u.5 for 101256820	osa-u.5 for 4350646	zma-u.5 for 103648038

Ortholog

Ortholog ID: 10093

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

ATP-dependent DNA helicase At3g02060, chloroplastic

DEAD/DEAH box helicase

ATP-dependent DNA helicase At3g02060, chloroplastic

putative ATP-dependent DNA helicase

transcription-repair-coupling factor

ATP-dependent DNA helicase At3g02060, chloroplastic

ATP-dependent DNA helicase chloroplastic

ATP-dependent DNA helicase At3g02060, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2
gma03010	Ribosome	2
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	2
ath03410	Base excision repair	2
ath03420	Nucleotide excision repair	2
ath03440	Homologous recombination	2
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

Expression

Expression pattern

Entrez Gene ID^*

11437254

100805206

100791900

7466312

7462386

821294

103849865

100251594

107888449

121221199

125602319

106436512

102609921

101256820

102592949

107814304

4350646

103648038

123086150

123092079

123448538

8056979

100828428

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11437254 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11437254 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11437254 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11437254 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**