ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11440619	eukaryotic translation initiation factor 5A-3
mtr-r.5	11440619	eukaryotic translation initiation factor 5A-3
mtr-m.5	11440619	eukaryotic translation initiation factor 5A-3
mtr-u.5	25494286	eukaryotic translation initiation factor 5A-2
mtr-u.5	25493853	eukaryotic translation initiation factor 5A-1
mtr-u.5	25490487	eukaryotic translation initiation factor 5A-4
gma-u.5	100499632	eukaryotic translation initiation factor 5A3
gma-u.5	EIF5A	eukaryotic translation initiation factor 5A
gma-u.5	100305991	eukaryotic translation initiation factor 5A-1
ppo-u.5	7498196	mitotic checkpoint protein BUB3.3
ppo-u.5	7489445	eukaryotic translation initiation factor 5A
ppo-u.5	7465957	eukaryotic translation initiation factor 5A
ath-u.5	ELF5A-1	eukaryotic elongation factor 5A-1
ath-u.5	ELF5A-3	eukaryotic elongation factor 5A-3
ath-u.5	FBR12	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein
vvi-u.5	100267006	eukaryotic translation initiation factor 5A
vvi-u.5	100247352	eukaryotic translation initiation factor 5A-2
vvi-u.5	100852874	eukaryotic translation initiation factor 5A-2
sly-u.5	eIF-5A3	eukaryotic translation initiation factor 5A-3
sly-u.5	eIF-5A2	eukaryotic translation initiation factor 5A-2
sly-u.5	101250392	eukaryotic translation initiation factor 5A-3
osa-u.5	4342241	eukaryotic translation initiation factor 5A-4
osa-u.5	4352300	eukaryotic translation initiation factor 5A-2
osa-u.5	4343796	eukaryotic translation initiation factor 5A
zma-u.5	100192991	eukaryotic translation initiation factor 5A-1/2
zma-u.5	542537	elongation initiation factor5A
zma-u.5	542601	eukaryotic translation initiation factor 5A

Top 50 coexpressed genes to 11440619 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11440619 (mtr-u.5 coexpression data)

CoexMap"11440619"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045901 [list] [network] positive regulation of translational elongation	(6 genes)	IEA
GO:0045905 [list] [network] positive regulation of translational termination	(6 genes)	IEA

GO CC

GO MF

GO:0003746 [list] [network] translation elongation factor activity	(60 genes)	IEA
GO:0043022 [list] [network] ribosome binding	(63 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1400 genes)	IEA

Protein

XP_003609143.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 1, mito 1, plas 1, extr 1, cyto_nucl 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1

(predict for XP_003609143.1)

Subcellular
localization
TargetP

other 7

(predict for XP_003609143.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11440619	mtr-r.5 for 11440619	mtr-m.5 for 11440619	mtr-u.5 for 25494286	mtr-u.5 for 25493853	mtr-u.5 for 25490487	gma-u.5 for 100499632	gma-u.5 for EIF5A	gma-u.5 for 100305991	ppo-u.5 for 7498196	ppo-u.5 for 7489445	ppo-u.5 for 7465957	ath-u.5 for ELF5A-1	ath-u.5 for ELF5A-3	ath-u.5 for FBR12	vvi-u.5 for 100267006	vvi-u.5 for 100247352	vvi-u.5 for 100852874	sly-u.5 for eIF-5A3	sly-u.5 for eIF-5A2	sly-u.5 for 101250392	osa-u.5 for 4342241	osa-u.5 for 4352300	osa-u.5 for 4343796	zma-u.5 for 100192991	zma-u.5 for 542537	zma-u.5 for 542601

Ortholog

Ortholog ID: 1002

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ELF5A-3

FBR12

eIF-5A1

Function^*

eukaryotic translation initiation factor 5A-2

eukaryotic translation initiation factor 5A-5

eukaryotic translation initiation factor 5A-1

uncharacterized LOC100305510

eukaryotic translation initiation factor 5A

mitotic checkpoint protein BUB3.3

eukaryotic elongation factor 5A-3

Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

eukaryotic translation initiation factor 5A-3

eukaryotic translation initiation factor 5A-2

eukaryotic translation initiation factor 5A-3

eukaryotic translation initiation factor 5A-1

eukaryotic translation initiation factor 5A-5-like

eukaryotic translation initiation factor 5A-4-like

eukaryotic translation initiation factor 5A-1

eukaryotic translation initiation factor 5A-3

eukaryotic translation initiation factor 5A-2

elongation initiation factor5A

eukaryotic translation initiation factor 5A

eukaryotic translation initiation factor 5A-4

eukaryotic translation initiation factor 5A-1-like

eukaryotic translation initiation factor 5A-4

eukaryotic translation initiation factor 5A-like

eukaryotic translation initiation factor 5A

eukaryotic translation initiation factor 5A-2

eukaryotic translation initiation factor 5A-1/2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2
mtr03420	Nucleotide excision repair	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00270	Cysteine and methionine metabolism	3
mtr00190	Oxidative phosphorylation	2
mtr00480	Glutathione metabolism	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	8
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	12
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	4
ghi00430	Taurine and hypotaurine metabolism	2
ghi00460	Cyanoamino acid metabolism	2
ghi00480	Glutathione metabolism	2
ghi00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	8
ghi04075	Plant hormone signal transduction	8
ghi04626	Plant-pathogen interaction	8
ghi04070	Phosphatidylinositol signaling system	6
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit03013	Nucleocytoplasmic transport	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04141	Protein processing in endoplasmic reticulum	3
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	5
sot04141	Protein processing in endoplasmic reticulum	5
sot03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta04145	Phagosome	7
nta04141	Protein processing in endoplasmic reticulum	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	5
tae03015	mRNA surveillance pathway	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu03040	Spliceosome	2
hvu03083	Polycomb repressive complex	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4
sbi00020	Citrate cycle (TCA cycle)	2
sbi00480	Glutathione metabolism	2
sbi01200	Carbon metabolism	2
sbi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01210	2-Oxocarboxylic acid metabolism	3
cre01230	Biosynthesis of amino acids	3
cre03013	Nucleocytoplasmic transport	2
cre00290	Valine, leucine and isoleucine biosynthesis	2
cre00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

25494286

11413270

100305991

100305510

7489445

7498196

843273

839203

103831337

103840630

100247352

100852874

107887366

121219353

106425610

106389545

102622877

102630849

101250392

543667

102605379

102587998

107823125

107788104

4352300

4334177

542537

542601

123102730

123119905

123426333

123452984

110432363

8060633

100822202

100842478

5725597

The preparation time of this page was 1.5 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11440619 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11440619 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**