ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11440981	acyltransferase-like protein At3g26840, chloroplastic
mtr-r.5	11440981	acyltransferase-like protein At3g26840, chloroplastic
mtr-m.5	11440981	acyltransferase-like protein At3g26840, chloroplastic
mtr-u.5	11429794	acyltransferase-like protein At1g54570, chloroplastic
mtr-u.5	11438979	acyltransferase-like protein At3g26840, chloroplastic
gma-u.5	100804605	acyltransferase-like protein At3g26840, chloroplastic
gma-u.5	100820592	acyltransferase-like protein At3g26840, chloroplastic
gma-u.5	100775444	acyltransferase-like protein At1g54570, chloroplastic
ppo-u.5	18110994	phytyl ester synthase 1, chloroplastic
ppo-u.5	18098903	phytyl ester synthase 1, chloroplastic
ath-u.5	AT3G02030	transferase
ath-u.5	PES2	Esterase/lipase/thioesterase family protein
vvi-u.5	100251524	phytyl ester synthase 2, chloroplastic
vvi-u.5	100246358	phytyl ester synthase 2, chloroplastic
vvi-u.5	100253864	phytyl ester synthase 1, chloroplastic
sly-u.5	101260190	phytyl ester synthase 2, chloroplastic
sly-u.5	101249584	phytyl ester synthase 1, chloroplastic
osa-u.5	4325812	phytyl ester synthase 1, chloroplastic
osa-u.5	4326030	phytyl ester synthase 1, chloroplastic
osa-u.5	4347534	phytyl ester synthase 1, chloroplastic
zma-u.5	100277398	uncharacterized LOC100277398
zma-u.5	103650176	Acyltransferase-like protein chloroplastic

Top 50 coexpressed genes to 11440981 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11440981 (mtr-u.5 coexpression data)

CoexMap"11440981"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr00073 [list] [network] Cutin, suberine and wax biosynthesis (43 genes)

mtr00561 [list] [network] Glycerolipid metabolism (93 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3455 genes)

IEA

GO MF

GO:0008374 [list] [network] O-acyltransferase activity

(125 genes)

IEA

Protein

XP_003624431.1 [sequence] [blastp]
XP_013449444.1 [sequence] [blastp]
XP_039683428.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1	(predict for XP_003624431.1)
chlo 8, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_013449444.1)
chlo 8, extr 1	(predict for XP_039683428.1)

Subcellular
localization
TargetP

chlo 4	(predict for XP_003624431.1)
mito 5	(predict for XP_013449444.1)
chlo 4	(predict for XP_039683428.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11440981	mtr-r.5 for 11440981	mtr-m.5 for 11440981	mtr-u.5 for 11429794	mtr-u.5 for 11438979	gma-u.5 for 100804605	gma-u.5 for 100820592	gma-u.5 for 100775444	ppo-u.5 for 18110994	ppo-u.5 for 18098903	ath-u.5 for AT3G02030	ath-u.5 for PES2	vvi-u.5 for 100251524	vvi-u.5 for 100246358	vvi-u.5 for 100253864	sly-u.5 for 101260190	sly-u.5 for 101249584	osa-u.5 for 4325812	osa-u.5 for 4326030	osa-u.5 for 4347534	zma-u.5 for 100277398	zma-u.5 for 103650176

Ortholog

Ortholog ID: 666

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PES2

Function^*

acyltransferase-like protein At3g26840, chloroplastic

acyltransferase-like protein At1g54570, chloroplastic

acyltransferase-like protein At3g26840, chloroplastic

phytyl ester synthase 1, chloroplastic

phytyl ester synthase 2, chloroplastic

Esterase/lipase/thioesterase family protein

acyltransferase-like protein At1g54570, chloroplastic

acyltransferase-like protein At3g26840, chloroplastic

phytyl ester synthase 2, chloroplastic

acyltransferase-like protein At1g54570, chloroplastic

phytyl ester synthase 2, chloroplastic

phytyl ester synthase 2, chloroplastic-like

phytyl ester synthase 1, chloroplastic

phytyl ester synthase 2, chloroplastic

acyltransferase-like protein At3g26840, chloroplastic

acyltransferase-like protein At1g54570, chloroplastic

phytyl ester synthase 1, chloroplastic

phytyl ester synthase 2, chloroplastic

phytyl ester synthase 1, chloroplastic

Acyltransferase-like protein chloroplastic

uncharacterized LOC100277398

acyltransferase-like protein At3g26840, chloroplastic

acyltransferase-like protein At1g54570, chloroplastic

acyltransferase-like protein At3g26840, chloroplastic

acyltransferase-like protein At1g54570, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma00561	Glycerolipid metabolism	2
gma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma03008	Ribosome biogenesis in eukaryotes	3
gma00240	Pyrimidine metabolism	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo00073	Cutin, suberine and wax biosynthesis	2
ppo00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	4
ath00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	2
bra00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04081	Hormone signaling	2
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	5
bna00561	Glycerolipid metabolism	5
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	4
bna00561	Glycerolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00906	Carotenoid biosynthesis	3
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta00561	Glycerolipid metabolism	2
nta02010	ABC transporters	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	3
osa00650	Butanoate metabolism	2
osa00410	beta-Alanine metabolism	2
osa00071	Fatty acid degradation	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2
hvu00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	3
sbi00620	Pyruvate metabolism	3
sbi00071	Fatty acid degradation	2
sbi00350	Tyrosine metabolism	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	4

Expression

Expression pattern

Entrez Gene ID^*

11440981

11438979

100775444

100820592

18110994

7495816

822299

103838728

103849863

100246358

100251524

107898140

106411264

106349312

102613514

102612827

101249584

101260190

102586418

102580179

107800599

107808813

4326030

4347534

103650176

100277398

123099152

123399821

8086355

8058981

100821255

100822939

5722567

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	2	2	3	2	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11440981 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11440981 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**