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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   NGR   Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS 
 ath-u.5   AT1G72490   uncharacterized protein 
 bra-r.6   103830789   uncharacterized LOC103830789 
 vvi-u.5   100249804   protein DEEPER ROOTING 1 
 ghi-r.1   107906053   protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS 
 sot-r.1   102585440   uncharacterized LOC102585440 
 sot-r.1   102585817   uncharacterized LOC102585817 
 nta-r.1   107776539   protein DEEPER ROOTING 1-like 
 osa-u.5   4347169   protein DEEPER ROOTING 1-like 
 zma-u.5   103632815   uncharacterized LOC103632815 
 tae-r.2   123124806   protein DEEPER ROOTING 1 
 tae-r.2   123103756   protein DEEPER ROOTING 1 
 hvu-r.1   123398715   protein DEEPER ROOTING 1-like 
 sbi-r.1   8080994   uncharacterized LOC8080994 

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Top 50 coexpressed genes to NGR (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NGR (mtr-u.5 coexpression data)

CoexMap"11441241"


mtrLOC11441241 | Entrez gene ID : 11441241      
Species mtr ath bra vvi ghi sot nta osa zma tae hvu sbi bdi sly bna ppo cre gma cit
Paralog 1 1 1 1 1 2 1 1 1 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009630 [list] [network] gravitropism  (16 genes)  IEA  
GO:0040008 [list] [network] regulation of growth  (34 genes)  IEA  
GO CC
GO MF
Protein XP_003595336.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 2,  cyto 1  (predict for XP_003595336.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for XP_003595336.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
NGR
ath-u.5
for
AT1G72490
bra-r.6
for
103830789
vvi-u.5
for
100249804
ghi-r.1
for
107906053
sot-r.1
for
102585440
sot-r.1
for
102585817
nta-r.1
for
107776539
osa-u.5
for
4347169
zma-u.5
for
103632815
tae-r.2
for
123124806
tae-r.2
for
123103756
hvu-r.1
for
123398715
sbi-r.1
for
8080994


Ortholog ID: 1771
Species mtr ath bra vvi ghi ghi sot sot nta osa zma tae tae hvu sbi
Symbol NGR AT1G72490 LOC103830789 LOC100249804 LOC107906053 LOC107958365 LOC102585440 LOC102585817 LOC107776539 LOC4347169 LOC103632815 LOC123103756 LOC123111974 LOC123398715 LOC8080994
Function* Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS uncharacterized protein uncharacterized LOC103830789 protein DEEPER ROOTING 1 protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS uncharacterized LOC102585440 uncharacterized LOC102585817 protein DEEPER ROOTING 1-like protein DEEPER ROOTING 1-like uncharacterized LOC103632815 protein DEEPER ROOTING 1 protein DEEPER ROOTING 1 protein DEEPER ROOTING 1-like uncharacterized LOC8080994
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 9
sot04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00071 Fatty acid degradation 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25500557 843581 103830789 100249804 107906053 107958365 102585440 102585817 107776539 4347169 103632815 123103756 123111974 123398715 8080994
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