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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   psbB   photosystem II 47 kDa protein 
 bna-r.1   111205513   photosystem II CP47 reaction center protein 
 bna-r.1   125602758   photosystem II CP47 reaction center protein 
 bna-r.1   125602776   photosystem II CP47 reaction center protein 
 bra-r.6   117129785   photosystem II CP47 reaction center protein 
 bra-r.6   117126236   photosystem II CP47 reaction center protein 
 ath-u.5   psbB   photosystem II 47 kDa protein 
 ghi-r.1   psbB   photosystem II P680 chlorophyll A apoprotein 
 cit-r.1   psbB   photosystem II 47 kDa protein 
 gma-u.5   psbB   photosystem II P680 chlorophyll A apoprotein 
 vvi-u.5   psbB   photosystem II P680 chlorophyll A apoprotein 
 ppo-u.5   psbB   photosystem II 47 kDa protein 
 mtr-u.5   psbB   photosystem II 47 kDa protein 
 mtr-u.5   120580174   photosystem II CP47 reaction center protein 
 sly-u.5   psbB   photosystem II CP47 chlorophyll apoprotein 
 sot-r.1   psbB   photosystem II 47 kDa protein 
 nta-r.1   psbB   photosystem II P680 chlorophyll A apoprotein 
 osa-u.5   psbB   photosystem II 47 kDa protein 
 zma-u.5   118475927   cytochrome f 
 zma-u.5   psbB   photosystem II 47 kDa protein 
 zma-u.5   118475031   photosystem II CP47 reaction center protein 
 tae-r.2   123171099   photosystem II CP47 reaction center protein 
 hvu-r.1   psbB   photosystem II 47 kDa protein 
 sbi-r.1   psbB   photosystem II 47 kDa protein 
 bdi-r.1   psbB   photosystem II 47 kDa protein 

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Top 50 coexpressed genes to psbB (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psbB (bna-r.1 coexpression data)

CoexMap"11542096"


bnapsbB | Entrez gene ID : 11542096    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 1 1 1 1 2 1 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO CC
GO MF
Protein YP_005089978.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  cyto_plas 4,  E.R. 2,  cyto 1  (predict for YP_005089978.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for YP_005089978.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
psbB
bna-r.1
for
111205513
bna-r.1
for
125602758
bna-r.1
for
125602776
bra-r.6
for
117129785
bra-r.6
for
117126236
ath-u.5
for
psbB
ghi-r.1
for
psbB
cit-r.1
for
psbB
gma-u.5
for
psbB
vvi-u.5
for
psbB
ppo-u.5
for
psbB
mtr-u.5
for
psbB
mtr-u.5
for
120580174
sly-u.5
for
psbB
sot-r.1
for
psbB
nta-r.1
for
psbB
osa-u.5
for
psbB
zma-u.5
for
118475927
zma-u.5
for
psbB
zma-u.5
for
118475031
tae-r.2
for
123171099
hvu-r.1
for
psbB
sbi-r.1
for
psbB
bdi-r.1
for
psbB


Ortholog ID: 3526
Species bna bna bna bra bra ath ghi cit gma vvi ppo mtr mtr sly sot nta osa zma zma zma tae hvu sbi bdi
Symbol LOC125602823 LOC125602824 LOC125600265 LOC117129785 LOC117126236 psbB psbB psbB psbB psbB psbB psbB LOC120580174 psbB psbB psbB psbB LOC118475927 psbB LOC118475031 LOC123171099 psbB psbB psbB
Function* photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein photosystem II P680 chlorophyll A apoprotein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II CP47 reaction center protein photosystem II CP47 chlorophyll apoprotein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein photosystem II 47 kDa protein cytochrome f photosystem II 47 kDa protein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II 47 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 14
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 5
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 11
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00710 Carbon fixation by Calvin cycle 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 13
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 16
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 13
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
mtr00630 Glyoxylate and dicarboxylate metabolism 5
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 14
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00190 Oxidative phosphorylation 3
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 12
nta00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 12
osa00190 Oxidative phosphorylation 6
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
zma03010 Ribosome 4
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma00195 Photosynthesis 5
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 15
hvu00190 Oxidative phosphorylation 6
hvu03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 10
sbi03010 Ribosome 7
sbi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 13
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125602823 125602824 125600265 117129785 117126236 844733 3989130 4271125 3989323 4025125 4929699 5333163 120580174 3950388 4099870 800527 3131410 118475927 845200 118475031 123171099 4525075 4549217 6439814
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