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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   118473166   glycine-rich RNA-binding protein 4, mitochondrial 
 zma-r.6   118473166   glycine-rich RNA-binding protein 4, mitochondrial 
 zma-u.5   100194217   responsive to abscisic acid15 
 zma-u.5   100191146   uncharacterized LOC100191146 
 zma-u.5   100284207   glycine-rich RNA-binding protein 7 
 sbi-r.1   8079176   glycine-rich RNA-binding protein 4, mitochondrial 
 sbi-r.1   110434104   glycine-rich RNA-binding protein 4, mitochondrial-like 
 sbi-r.1   8060654   glycine-rich RNA-binding protein 8 
 osa-u.5   4343831   glycine-rich RNA-binding protein 2, mitochondrial 
 osa-u.5   9269592   organelle RRM domain-containing protein 6, chloroplastic 
 osa-u.5   9266763   small RNA-binding protein 11, chloroplastic 
 tae-r.2   123080303   glycine-rich RNA-binding protein 2, mitochondrial 
 tae-r.2   123063110   glycine-rich RNA-binding protein 2, mitochondrial 
 tae-r.2   123071960   glycine-rich RNA-binding protein 2, mitochondrial 
 hvu-r.1   123448995   organelle RRM domain-containing protein 6, chloroplastic-like 
 hvu-r.1   123452897   glycine-rich RNA-binding protein 2, mitochondrial-like 
 hvu-r.1   123445239   glycine-rich RNA-binding protein 2, mitochondrial-like 
 bdi-r.1   100823193   glycine-rich RNA-binding protein 2, mitochondrial 
 bdi-r.1   100825748   glycine-rich RNA-binding protein 1 
 ath-u.5   CCR1   cold, circadian rhythm, and RNA binding 1 
 ath-u.5   AT1G73530   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   GR-RBP3   glycine-rich RNA-binding protein 3 
 gma-u.5   100806292   glycine-rich RNA-binding protein GRP1A 
 gma-u.5   100799124   heterogeneous nuclear ribonucleoprotein D-like 
 gma-u.5   100796704   RNA recognition motif-containing protein 
 sly-u.5   101266771   glycine-rich RNA-binding protein 
 sly-u.5   GRP1   glycine-rich RNA-binding protein-like 
 sly-u.5   101262262   glycine-rich RNA-binding protein 
 bra-r.6   103864290   glycine-rich RNA-binding protein GRP2A 
 bra-r.6   103842502   glycine-rich RNA-binding protein GRP1A 
 vvi-u.5   100853676   glycine-rich RNA-binding protein GRP2A 
 vvi-u.5   100263981   small RNA-binding protein 11, chloroplastic 
 vvi-u.5   100854881   small RNA-binding protein 11, chloroplastic 
 ppo-u.5   7485722   small RNA-binding protein 11, chloroplastic 
 ppo-u.5   7487102   glycine-rich RNA-binding protein 4, mitochondrial 
 mtr-u.5   11413936   glycine-rich RNA-binding protein GRP1A 
 mtr-u.5   11428326   glycine-rich RNA-binding protein 3, mitochondrial 
 mtr-u.5   11420057   glycine-rich RNA-binding protein GRP1A 
 ghi-r.1   107929711   small RNA-binding protein 11, chloroplastic 
 ghi-r.1   107928749   glycine-rich RNA-binding protein GRP1A 
 ghi-r.1   107928000   glycine-rich RNA-binding protein GRP2A 
 bna-r.1   125605193   glycine-rich RNA-binding protein 2, mitochondrial-like 
 bna-r.1   106381370   glycine-rich RNA-binding protein 5, mitochondrial-like 
 bna-r.1   106381665   organelle RRM domain-containing protein 6, chloroplastic-like 
 sot-r.1   102605902   glycine-rich RNA-binding protein 3, mitochondrial 
 sot-r.1   102604109   glycine-rich RNA-binding protein 3, mitochondrial 
 sot-r.1   102600363   glycine-rich RNA-binding protein-like 
 cit-r.1   102625620   glycine-rich RNA-binding protein 2, mitochondrial 
 cit-r.1   102623019   glycine-rich RNA-binding protein 2, mitochondrial 
 cit-r.1   102620823   small RNA-binding protein 11, chloroplastic-like 
 nta-r.1   107825574   glycine-rich RNA-binding protein 4, mitochondrial-like 
 nta-r.1   107795904   small RNA-binding protein 11, chloroplastic-like 
 nta-r.1   107795042   glycine-rich RNA-binding protein GRP1A 
 cre-r.1   CHLRE_17g729150v5   uncharacterized protein 
 cre-r.1   CHLRE_02g079400v5   uncharacterized protein 
 cre-r.1   CHLRE_13g602850v5   uncharacterized protein 

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Top 50 coexpressed genes to 118473166 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 118473166 (zma-u.5 coexpression data)

CoexMap"118473166"


zmaLOC118473166 | Entrez gene ID : 118473166    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 3 3 3 3 2 3 3 3 2 3 2 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein XP_035817792.1 [sequence] [blastp]
XP_035817793.1 [sequence] [blastp]
XP_035817794.1 [sequence] [blastp]
XP_035817795.1 [sequence] [blastp]
XP_035817796.1 [sequence] [blastp]
XP_035817797.1 [sequence] [blastp]
XP_035817798.1 [sequence] [blastp]
XP_035817799.1 [sequence] [blastp]
XP_035817800.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4,  cyto 1,  vacu 1  (predict for XP_035817792.1)
mito 6,  chlo 4  (predict for XP_035817793.1)
mito 6,  chlo 4  (predict for XP_035817794.1)
mito 6,  chlo 4  (predict for XP_035817795.1)
mito 8,  chlo 2  (predict for XP_035817796.1)
mito 8,  chlo 2  (predict for XP_035817797.1)
mito 7,  chlo 2  (predict for XP_035817798.1)
mito 7,  chlo 2  (predict for XP_035817799.1)
mito 7,  chlo 3  (predict for XP_035817800.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_035817792.1)
mito 8  (predict for XP_035817793.1)
mito 8  (predict for XP_035817794.1)
mito 8  (predict for XP_035817795.1)
mito 9  (predict for XP_035817796.1)
mito 9  (predict for XP_035817797.1)
mito 9  (predict for XP_035817798.1)
mito 9  (predict for XP_035817799.1)
mito 8  (predict for XP_035817800.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
118473166
zma-r.6
for
118473166
zma-u.5
for
100194217
zma-u.5
for
100191146
zma-u.5
for
100284207
sbi-r.1
for
8079176
sbi-r.1
for
110434104
sbi-r.1
for
8060654
osa-u.5
for
4343831
osa-u.5
for
9269592
osa-u.5
for
9266763
tae-r.2
for
123080303
tae-r.2
for
123063110
tae-r.2
for
123071960
hvu-r.1
for
123448995
hvu-r.1
for
123452897
hvu-r.1
for
123445239
bdi-r.1
for
100823193
bdi-r.1
for
100825748
ath-u.5
for
CCR1
ath-u.5
for
AT1G73530
ath-u.5
for
GR-RBP3
gma-u.5
for
100806292
gma-u.5
for
100799124
gma-u.5
for
100796704
sly-u.5
for
101266771
sly-u.5
for
GRP1
sly-u.5
for
101262262
bra-r.6
for
103864290
bra-r.6
for
103842502
vvi-u.5
for
100853676
vvi-u.5
for
100263981
vvi-u.5
for
100854881
ppo-u.5
for
7485722
ppo-u.5
for
7487102
mtr-u.5
for
11413936
mtr-u.5
for
11428326
mtr-u.5
for
11420057
ghi-r.1
for
107929711
ghi-r.1
for
107928749
ghi-r.1
for
107928000
bna-r.1
for
125605193
bna-r.1
for
106381370
bna-r.1
for
106381665
sot-r.1
for
102605902
sot-r.1
for
102604109
sot-r.1
for
102600363
cit-r.1
for
102625620
cit-r.1
for
102623019
cit-r.1
for
102620823
nta-r.1
for
107825574
nta-r.1
for
107795904
nta-r.1
for
107795042
cre-r.1
for
CHLRE_17g729150v5
cre-r.1
for
CHLRE_02g079400v5
cre-r.1
for
CHLRE_13g602850v5


Ortholog ID: 75
Species zma zma zma sbi sbi sbi osa osa osa tae tae tae hvu hvu hvu bdi bdi ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta cre cre cre
Symbol LOC100284207 LOC542725 LOC100191295 LOC8079176 LOC110434104 LOC8075292 LOC4343831 LOC9266763 LOC4352279 LOC123072018 LOC123134221 LOC123097872 LOC123425384 LOC123400027 LOC123403078 LOC100840808 LOC100842305 AT5G06210 AT3G08000 LOC100796704 LOC100305467 LOC100777821 LOC101257264 LOC101254436 LOC101245474 LOC103835157 LOC103852851 LOC103851541 LOC100263981 LOC100854881 LOC100246039 LOC7485722 LOC7485193 LOC18109442 LOC11436305 LOC25499413 LOC25497346 LOC107896330 LOC107960836 LOC107952135 LOC106365965 LOC106439949 LOC102581514 LOC102587142 LOC102587662 LOC102623019 LOC102608923 LOC102627364 LOC107787039 LOC107759364 LOC142161681 CHLRE_02g079400v5 CHLRE_01g032300v5 CHLRE_09g392350v5
Function* glycine-rich RNA-binding protein 7 uncharacterized LOC542725 Glycine-rich RNA-binding protein 3 mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial-like small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein 2, mitochondrial small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein blt801 glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein organelle RRM domain-containing protein 6, chloroplastic loricrin-like glycine-rich RNA-binding protein blt801-like glycine-rich RNA-binding protein-like glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein blt801 RNA binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein RNA recognition motif-containing protein putative glycine-rich RNA binding protein glycine-rich RNA-binding protein 2 glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 10 organelle RRM domain-containing protein 6, chloroplastic cold-inducible RNA-binding protein small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 6, chloroplastic small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 6, chloroplastic small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein 2, mitochondrial small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 6, chloroplastic small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein GRP1A glycine-rich RNA-binding protein GRP1A glycine-rich RNA-binding protein 3, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein glycine-rich RNA-binding protein 2, mitochondrial-like glycine-rich RNA-binding protein 2, mitochondrial small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 2, mitochondrial-like glycine-rich RNA-binding protein 3, mitochondrial-like glycine-rich RNA-binding protein 2, mitochondrial-like glycine-rich RNA-binding protein-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 3
sbi04517 IgSF CAM signaling 3
sbi04814 Motor proteins 3
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03420 Nucleotide excision repair 5
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 4
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03040 Spliceosome 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 3
mtr03420 Nucleotide excision repair 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
ghi00940 Phenylpropanoid biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04626 Plant-pathogen interaction 4
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03008 Ribosome biogenesis in eukaryotes 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100284207 542725 100191295 8079176 110434104 8075292 4343831 9266763 4352279 123072018 123134221 123097872 123425384 123400027 123403078 100840808 100842305 830508 819991 100796704 100305467 100777821 101257264 101254436 101245474 103835157 103852851 103851541 100263981 100854881 100246039 7485722 7485193 18109442 11436305 25499413 25497346 107896330 107960836 107952135 106365965 106439949 102581514 102587142 102587662 102623019 102608923 102627364 107787039 107759364 142161681 5727272 5715399 5720095
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