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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   118475927   cytochrome f 
 zma-r.6   118475927   cytochrome f 
 zma-u.5   118475031   photosystem II CP47 reaction center protein 
 zma-u.5   psbB   photosystem II 47 kDa protein 
 osa-u.5   psbB   photosystem II 47 kDa protein 
 ath-u.5   psbB   photosystem II 47 kDa protein 
 gma-u.5   psbB   photosystem II P680 chlorophyll A apoprotein 
 sly-u.5   psbB   photosystem II CP47 chlorophyll apoprotein 
 vvi-u.5   psbB   photosystem II P680 chlorophyll A apoprotein 
 ppo-u.5   psbB   photosystem II 47 kDa protein 
 mtr-u.5   120580174   photosystem II CP47 reaction center protein 
 mtr-u.5   psbB   photosystem II 47 kDa protein 

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Top 50 coexpressed genes to 118475927 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 118475927 (zma-u.5 coexpression data)

CoexMap"118475927"


zmaLOC118475927 | Entrez gene ID : 118475927    
Species zma osa ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00195 [list] [network] Photosynthesis (146 genes)
GO BP
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II  (10 genes)  IEA  
GO:0019684 [list] [network] photosynthesis, light reaction  (74 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (149 genes)  IEA  
GO CC
GO:0009523 [list] [network] photosystem II  (52 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (153 genes)  IEA  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (2 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (373 genes)  IEA  
GO:0020037 [list] [network] heme binding  (498 genes)  IEA  
Protein XP_035819875.1 [sequence] [blastp]
XP_035819876.1 [sequence] [blastp]
XP_035819877.1 [sequence] [blastp]
XP_035819878.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  cyto_plas 4,  E.R. 2,  cyto 1,  mito 1,  vacu 1  (predict for XP_035819875.1)
plas 5,  cyto_plas 4,  E.R. 2,  cyto 1,  mito 1,  vacu 1  (predict for XP_035819876.1)
plas 5,  cyto_plas 4,  E.R. 2,  cyto 1,  mito 1,  vacu 1  (predict for XP_035819877.1)
cyto 3,  nucl 2,  extr 1,  vacu 1,  golg 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_035819878.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_035819875.1)
mito 6,  other 3  (predict for XP_035819876.1)
mito 6,  other 3  (predict for XP_035819877.1)
other 4  (predict for XP_035819878.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
118475927
zma-r.6
for
118475927
zma-u.5
for
118475031
zma-u.5
for
psbB
osa-u.5
for
psbB
ath-u.5
for
psbB
gma-u.5
for
psbB
sly-u.5
for
psbB
vvi-u.5
for
psbB
ppo-u.5
for
psbB
mtr-u.5
for
120580174
mtr-u.5
for
psbB


Ortholog ID: 3526
Species zma zma sbi osa tae hvu bdi ath gma sly bra bra vvi mtr mtr ghi bna bna sot cit nta
Symbol LOC118475031 psbB psbB psbB LOC123171099 psbB psbB psbB psbB psbB LOC117129785 LOC117126236 psbB LOC120580174 psbB psbB LOC125602823 LOC125602824 psbB psbB psbB
Function* photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein photosystem II CP47 chlorophyll apoprotein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II P680 chlorophyll A apoprotein photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein photosystem II CP47 reaction center protein photosystem II CP47 reaction center protein photosystem II 47 kDa protein photosystem II 47 kDa protein photosystem II P680 chlorophyll A apoprotein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma00195 Photosynthesis 5
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 10
sbi03010 Ribosome 7
sbi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 12
osa00190 Oxidative phosphorylation 6
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 15
hvu00190 Oxidative phosphorylation 6
hvu03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 13
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 14
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 5
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 16
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
mtr00630 Glyoxylate and dicarboxylate metabolism 5
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 11
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00710 Carbon fixation by Calvin cycle 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 14
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00190 Oxidative phosphorylation 3
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 13
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 12
nta00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 118475031 845200 4549217 3131410 123171099 4525075 6439814 844733 3989323 3950388 117129785 117126236 4025125 120580174 5333163 3989130 125602823 125602824 4099870 4271125 800527
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