ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11442984	F-box protein SKIP24
gma-u.5	100818388	F-box protein SKIP24
ppo-u.5	7482391	F-box protein SKIP24
ath-u.5	AT1G08710	F-box family protein
bra-r.6	103871615	F-box protein SKIP24
vvi-u.5	100251817	F-box protein SKIP24
ghi-r.1	107940670	F-box protein SKIP24
ghi-r.1	107893858	F-box protein SKIP24
bna-r.1	106402251	F-box protein SKIP24-like
bna-r.1	106346312	F-box protein SKIP24
cit-r.1	102610920	F-box protein SKIP24
sly-u.5	101246981	F-box protein SKIP24
sot-r.1	102589928	F-box protein SKIP24
nta-r.1	107760473	F-box protein SKIP24
nta-r.1	107815405	F-box protein SKIP24
osa-u.5	4327602	F-box protein SKIP24
zma-u.5	100281037	uncharacterized LOC100281037
tae-r.2	123079537	F-box protein SKIP24
tae-r.2	123071177	F-box protein SKIP24
tae-r.2	123062397	F-box protein SKIP24
hvu-r.1	123444684	F-box protein SKIP24
sbi-r.1	8085382	F-box protein SKIP24
bdi-r.1	100831416	F-box protein SKIP24

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(5045 genes)

IEA

Protein

XP_039683928.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, golg 1, chlo 1, plas 1, extr 1, E.R. 1, E.R._plas 1

(predict for XP_039683928.1)

Subcellular
localization
TargetP

other 6

(predict for XP_039683928.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11442984	gma-u.5 for 100818388	ppo-u.5 for 7482391	ath-u.5 for AT1G08710	bra-r.6 for 103871615	vvi-u.5 for 100251817	ghi-r.1 for 107940670	ghi-r.1 for 107893858	bna-r.1 for 106402251	bna-r.1 for 106346312	cit-r.1 for 102610920	sly-u.5 for 101246981	sot-r.1 for 102589928	nta-r.1 for 107760473	nta-r.1 for 107815405	osa-u.5 for 4327602	zma-u.5 for 100281037	tae-r.2 for 123079537	tae-r.2 for 123071177	tae-r.2 for 123062397	hvu-r.1 for 123444684	sbi-r.1 for 8085382	bdi-r.1 for 100831416

Ortholog

Ortholog ID: 11037

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

F-box protein SKIP24

F-box family protein

F-box protein SKIP24

F-box protein SKIP24-like

F-box protein SKIP24

uncharacterized LOC100281037

F-box protein SKIP24

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	6
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

11442984

100818388

7482391

837392

103871615

100251817

107940670

107893858

106402251

106346312

102610920

101246981

102589928

107760473

107815405

4327602

100281037

123079537

123071177

123062397

123444684

8085382

100831416

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11442984 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11442984 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	1	1	1	2	2	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11442984 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11442984 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**