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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11435042   SNF2 domain-containing protein CLASSY 1 
 gma-u.5   100811703   SNF2 domain-containing protein CLASSY 1 
 gma-u.5   100785036   SNF2 domain-containing protein CLASSY 2 
 ppo-u.5   7462098   SNF2 domain-containing protein CLASSY 2 
 ath-u.5   CHR38   chromatin remodeling 38 
 ath-u.5   CHR42   chromatin remodeling 42 
 bra-r.6   103834007   SNF2 domain-containing protein CLASSY 1 
 vvi-u.5   100250037   SNF2 domain-containing protein CLASSY 1 
 ghi-r.1   107962126   SNF2 domain-containing protein CLASSY 1 
 ghi-r.1   107900547   SNF2 domain-containing protein CLASSY 1 
 bna-r.1   106436900   SNF2 domain-containing protein CLASSY 1 
 cit-r.1   102611707   SNF2 domain-containing protein CLASSY 1-like 
 cit-r.1   102610506   SNF2 domain-containing protein CLASSY 1-like 
 sly-u.5   101262122   SNF2 domain-containing protein CLASSY 1-like 
 sot-r.1   102579983   SNF2 domain-containing protein CLASSY 1-like 
 nta-r.1   107789754   SNF2 domain-containing protein CLASSY 1 
 nta-r.1   107807410   SNF2 domain-containing protein CLASSY 1-like 
 osa-u.5   4344376   SNF2 domain-containing protein CLASSY 1 
 zma-u.5   103633601   SNF2 domain-containing protein CLASSY 1 
 sbi-r.1   8084981   SNF2 domain-containing protein CLASSY 1 
 bdi-r.1   100839149   SNF2 domain-containing protein CLASSY 1 

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Top 50 coexpressed genes to 11435042 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11435042 (mtr-u.5 coexpression data)

CoexMap"120578623"


mtrLOC120578623 | Entrez gene ID : 120578623    
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma sbi bdi tae cre hvu
Paralog 1 2 1 2 1 1 2 1 2 1 1 2 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03440 [list] [network] Homologous recombination (67 genes)
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (33 genes)  IEA  
GO CC
GO MF
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
Protein XP_039687087.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_039687087.1)
Subcellular
localization
TargetP
other 8  (predict for XP_039687087.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11435042
gma-u.5
for
100811703
gma-u.5
for
100785036
ppo-u.5
for
7462098
ath-u.5
for
CHR38
ath-u.5
for
CHR42
bra-r.6
for
103834007
vvi-u.5
for
100250037
ghi-r.1
for
107962126
ghi-r.1
for
107900547
bna-r.1
for
106436900
cit-r.1
for
102611707
cit-r.1
for
102610506
sly-u.5
for
101262122
sot-r.1
for
102579983
nta-r.1
for
107789754
nta-r.1
for
107807410
osa-u.5
for
4344376
zma-u.5
for
103633601
sbi-r.1
for
8084981
bdi-r.1
for
100839149


Ortholog ID: 6279
Species mtr gma gma ppo ath ath bra vvi ghi ghi bna bna cit cit sly sot nta nta osa zma sbi bdi
Symbol LOC11435042 LOC100811703 LOC100785036 LOC7462098 CHR38 CHR42 LOC103834007 LOC100250037 LOC107962126 LOC107900547 LOC106436900 LOC106360714 LOC102611707 LOC102610506 LOC101262122 LOC102579983 LOC107789754 LOC107807410 LOC4344376 LOC103633601 LOC8084981 LOC100839149
Function* SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 2 SNF2 domain-containing protein CLASSY 2 chromatin remodeling 38 chromatin remodeling 42 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1-like SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 5
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra03020 RNA polymerase 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00051 Fructose and mannose metabolism 6
ghi03013 Nucleocytoplasmic transport 4
ghi04075 Plant hormone signal transduction 4
ghi00562 Inositol phosphate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00051 Fructose and mannose metabolism 6
ghi03013 Nucleocytoplasmic transport 4
ghi04075 Plant hormone signal transduction 4
ghi00562 Inositol phosphate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11435042 100811703 100785036 7462098 823287 832164 103834007 100250037 107962126 107900547 106436900 106360714 102611707 102610506 101262122 102579983 107789754 107807410 4344376 103633601 8084981 100839149
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