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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   120580077   cytochrome f 
 mtr-r.5   120580077   cytochrome f 
 mtr-u.5   120580171   cytochrome f 
 mtr-u.5   petA   cytochrome f 
 gma-u.5   121173225   cytochrome f-like 
 gma-u.5   petA   apocytochrome f precursor 
 ppo-u.5   petA   cytochrome f 
 ath-u.5   petA   cytochrome f 
 vvi-u.5   petA   cytochrome f 
 vvi-u.5   petA   apocytochrome f precursor 
 sly-u.5   petA   cytochrome f 
 osa-u.5   petA   cytochrome f 
 zma-u.5   118474823   cytochrome f 
 zma-u.5   118473655   cytochrome f 

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Top 50 coexpressed genes to 120580077 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 120580077 (mtr-u.5 coexpression data)

CoexMap"120580077"


mtrLOC120580077 | Entrez gene ID : 120580077    
Species mtr gma ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00195 [list] [network] Photosynthesis (100 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (117 genes)  IEA  
GO MF
GO:0009055 [list] [network] electron transfer activity  (129 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (450 genes)  IEA  
GO:0020037 [list] [network] heme binding  (538 genes)  IEA  
Protein XP_039688979.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 2,  cyto_nucl 1,  cyto_plas 1,  plas 1,  chlo_mito 1  (predict for XP_039688979.1)
Subcellular
localization
TargetP
other 6  (predict for XP_039688979.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
120580077

.
mtr-r.5
for
120580077

.
mtr-u.5
for
120580171

.
mtr-u.5
for
petA

.
gma-u.5
for
121173225

.
gma-u.5
for
petA

.
ppo-u.5
for
petA

.
ath-u.5
for
petA

.
vvi-u.5
for
petA

.
vvi-u.5
for
petA

.
sly-u.5
for
petA

.
osa-u.5
for
petA

.
zma-u.5
for
118474823

.
zma-u.5
for
118473655

.


Ortholog ID: 7101
Species ath gma gma sly osa zma vvi ppo mtr mtr ghi sbi sot cit bdi nta
Symbol petA petA LOC121173225 petA petA LOC118474823 petA petA LOC120580171 petA petA petA petA petA petA petA
Function* cytochrome f apocytochrome f precursor cytochrome f-like cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f apocytochrome f precursor cytochrome f cytochrome f cytochrome f cytochrome f apocytochrome f precursor
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00190 Oxidative phosphorylation 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath01200 Carbon metabolism 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 11
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 4
osa03020 RNA polymerase 3
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03020 RNA polymerase 5
ppo00195 Photosynthesis 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 12
mtr00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00061 Fatty acid biosynthesis 3
ghi00620 Pyruvate metabolism 3
ghi00640 Propanoate metabolism 3
ghi01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00195 Photosynthesis 6
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 3
cit03020 RNA polymerase 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 11
bdi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta00190 Oxidative phosphorylation 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844748 3989309 121173225 3950466 3131402 118474823 7498572 4929683 120580171 5333092 3989162 4549172 4099990 4271218 6439865 800461
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