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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100812333   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11442578   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   120577068   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   7461195   transcription termination factor MTEF1, chloroplastic 
 ath-u.5   AT3G18870   Mitochondrial transcription termination factor family protein 
 bra-r.6   103869515   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100853221   transcription termination factor MTEF1, chloroplastic 
 ghi-r.1   107945162   transcription termination factor MTEF1, chloroplastic 
 ghi-r.1   107898758   transcription termination factor MTEF1, chloroplastic 
 bna-r.1   106451921   transcription termination factor MTEF1, chloroplastic-like 
 bna-r.1   BNAC05G34150D   transcription termination factor MTEF1, chloroplastic 
 cit-r.1   102620107   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101266172   transcription termination factor MTEF1, chloroplastic 
 sot-r.1   107058496   uncharacterized LOC107058496 
 nta-r.1   107793268   transcription termination factor MTEF1, chloroplastic-like 

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Top 50 coexpressed genes to 100812333 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100812333 (gma-u.5 coexpression data)

CoexMap"121172859"


gmaLOC121172859 | Entrez gene ID : 121172859    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta bdi osa tae zma cre sbi hvu
Paralog 1 2 1 1 1 1 2 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (950 genes)  IEA  
Protein XP_040861442.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_E.R. 2,  nucl 1,  mito 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040861442.1)
Subcellular
localization
TargetP
scret 7,  mito 4,  other 3  (predict for XP_040861442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100812333
mtr-u.5
for
11442578
mtr-u.5
for
120577068
ppo-u.5
for
7461195
ath-u.5
for
AT3G18870
bra-r.6
for
103869515
vvi-u.5
for
100853221
ghi-r.1
for
107945162
ghi-r.1
for
107898758
bna-r.1
for
106451921
bna-r.1
for
BNAC05G34150D
cit-r.1
for
102620107
sly-u.5
for
101266172
sot-r.1
for
107058496
nta-r.1
for
107793268


Ortholog ID: 12655
Species gma mtr mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta
Symbol LOC100812333 LOC11442578 LOC120577068 LOC7461195 AT3G18870 LOC103869515 LOC100853221 LOC107945162 LOC107898758 LOC106451921 BNAC05G34150D LOC102620107 LOC101266172 LOC107058496 LOC107793268
Function* transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic Mitochondrial transcription termination factor family protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic-like transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC107058496 transcription termination factor MTEF1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00790 Folate biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 4
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100812333 11442578 120577068 7461195 821420 103869515 100853221 107945162 107898758 106451921 106446849 102620107 101266172 107058496 107793268
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