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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121203607   ATP-citrate synthase beta chain protein 2 
 ghi-r.1   107936129   ATP-citrate synthase beta chain protein 2 
 ghi-r.1   107896593   ATP-citrate synthase beta chain protein 2 
 ghi-r.1   107916207   ATP-citrate synthase beta chain protein 2 
 ath-u.5   ACLB-1   ATP-citrate lyase B-1 
 ath-u.5   ACLB-2   ATP citrate lyase subunit B 2 
 bra-r.6   103837286   ATP-citrate synthase beta chain protein 2 
 bra-r.6   103854601   ATP-citrate synthase beta chain protein 2 
 bna-r.1   111197906   ATP-citrate synthase beta chain protein 2 
 bna-r.1   106403002   ATP-citrate synthase beta chain protein 2 
 bna-r.1   106365855   ATP-citrate synthase beta chain protein 2 
 cit-r.1   102618571   ATP-citrate synthase beta chain protein 2 
 gma-u.5   100800904   ATP-citrate synthase beta chain protein 1 
 gma-u.5   100796266   ATP-citrate synthase beta chain protein 1 
 gma-u.5   100780205   ATP-citrate synthase beta chain protein 2 
 vvi-u.5   100267071   ATP-citrate synthase beta chain protein 2 
 ppo-u.5   7485903   ATP-citrate synthase beta chain protein 2 
 ppo-u.5   7485824   ATP-citrate synthase beta chain protein 2 
 mtr-u.5   11413900   ATP-citrate synthase beta chain protein 1 
 sly-u.5   101263147   ATP-citrate synthase beta chain protein 2-like 
 sly-u.5   101267503   ATP-citrate synthase beta chain protein 2 
 sot-r.1   102584948   ATP-citrate synthase beta chain protein 2 
 sot-r.1   102579671   ATP-citrate synthase beta chain protein 2-like 
 nta-r.1   107793546   ATP-citrate synthase beta chain protein 2-like 
 nta-r.1   107778993   ATP-citrate synthase beta chain protein 2 
 nta-r.1   107766682   ATP-citrate synthase beta chain protein 2-like 
 osa-u.5   4325777   ATP-citrate synthase beta chain protein 1-like 
 zma-u.5   103635086   ATP-citrate synthase beta chain protein 1 
 zma-u.5   100381760   uncharacterized LOC100381760 
 tae-r.2   123164448   ATP-citrate synthase beta chain protein 1 
 tae-r.2   123157439   ATP-citrate synthase beta chain protein 1 
 tae-r.2   123148541   ATP-citrate synthase beta chain protein 1 
 hvu-r.1   123443551   ATP-citrate synthase beta chain protein 1 
 hvu-r.1   123413670   ATP-citrate synthase beta chain protein 1-like 
 sbi-r.1   110433903   ATP-citrate synthase beta chain protein 1 
 bdi-r.1   100829187   ATP-citrate synthase beta chain protein 1 
 cre-r.1   CHLRE_02g088600v5   uncharacterized protein 

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Top 50 coexpressed genes to 121203607 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121203607 (ghi-r.1 coexpression data)

CoexMap"121203607"


ghiLOC121203607 | Entrez gene ID : 121203607    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 1 2 1 2 2 3 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00020 [list] [network] Citrate cycle (TCA cycle) (143 genes)
GO BP
GO:0006085 [list] [network] acetyl-CoA biosynthetic process  (51 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (119 genes)  IEA  
GO:0006633 [list] [network] fatty acid biosynthetic process  (270 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0003878 [list] [network] ATP citrate synthase activity  (12 genes)  IEA  
Protein XP_040959193.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_040959193.1)
Subcellular
localization
TargetP
scret 4,  chlo 3  (predict for XP_040959193.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121203607
ghi-r.1
for
107936129
ghi-r.1
for
107896593
ghi-r.1
for
107916207
ath-u.5
for
ACLB-1
ath-u.5
for
ACLB-2
bra-r.6
for
103837286
bra-r.6
for
103854601
bna-r.1
for
111197906
bna-r.1
for
106403002
bna-r.1
for
106365855
cit-r.1
for
102618571
gma-u.5
for
100800904
gma-u.5
for
100796266
gma-u.5
for
100780205
vvi-u.5
for
100267071
ppo-u.5
for
7485903
ppo-u.5
for
7485824
mtr-u.5
for
11413900
sly-u.5
for
101263147
sly-u.5
for
101267503
sot-r.1
for
102584948
sot-r.1
for
102579671
nta-r.1
for
107793546
nta-r.1
for
107778993
nta-r.1
for
107766682
osa-u.5
for
4325777
zma-u.5
for
103635086
zma-u.5
for
100381760
tae-r.2
for
123164448
tae-r.2
for
123157439
tae-r.2
for
123148541
hvu-r.1
for
123443551
hvu-r.1
for
123413670
sbi-r.1
for
110433903
bdi-r.1
for
100829187
cre-r.1
for
CHLRE_02g088600v5


Ortholog ID: 4223
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC107936129 LOC107896593 LOC107936128 ACLB-1 ACLB-2 LOC103837286 LOC103854601 LOC111197906 LOC106403002 LOC106365855 LOC102618571 LOC100796266 LOC100801407 LOC100795745 LOC100267071 LOC7485903 LOC7485824 LOC11413900 LOC101263147 LOC101267503 LOC102584948 LOC102579671 LOC107793546 LOC107778993 LOC107766682 LOC4325777 LOC103635086 LOC100381760 LOC123164448 LOC123078214 LOC123069747 LOC123443551 LOC123413670 LOC110433903 LOC100829187 CHLRE_02g088600v5
Function* ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate lyase B-1 ATP citrate lyase subunit B 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 2-like ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2-like ATP-citrate synthase beta chain protein 2-like ATP-citrate synthase beta chain protein 2 ATP-citrate synthase beta chain protein 2-like ATP-citrate synthase beta chain protein 1-like ATP-citrate synthase beta chain protein 1 uncharacterized LOC100381760 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 1-like ATP-citrate synthase beta chain protein 1 ATP-citrate synthase beta chain protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 10
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 10
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 10
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 4
ath00900 Terpenoid backbone biosynthesis 2
ath00620 Pyruvate metabolism 2
ath01212 Fatty acid metabolism 2
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 4
ath00900 Terpenoid backbone biosynthesis 4
ath00010 Glycolysis / Gluconeogenesis 4
ath00030 Pentose phosphate pathway 3
ath00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 5
bra01200 Carbon metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00190 Oxidative phosphorylation 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 8
bra01200 Carbon metabolism 5
bra01210 2-Oxocarboxylic acid metabolism 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma00620 Pyruvate metabolism 2
gma01200 Carbon metabolism 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00062 Fatty acid elongation 3
gma04626 Plant-pathogen interaction 3
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 6
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
gma00020 Citrate cycle (TCA cycle) 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 5
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
vvi00020 Citrate cycle (TCA cycle) 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 10
ppo00270 Cysteine and methionine metabolism 6
ppo00020 Citrate cycle (TCA cycle) 4
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ppo00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo00020 Citrate cycle (TCA cycle) 4
ppo01200 Carbon metabolism 4
ppo00270 Cysteine and methionine metabolism 3
ppo00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr00020 Citrate cycle (TCA cycle) 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00650 Butanoate metabolism 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 9
sly01200 Carbon metabolism 9
sly00900 Terpenoid backbone biosynthesis 5
sly01210 2-Oxocarboxylic acid metabolism 4
sly00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 7
sly00100 Steroid biosynthesis 3
sly00280 Valine, leucine and isoleucine degradation 3
sly00620 Pyruvate metabolism 3
sly00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 8
sot00020 Citrate cycle (TCA cycle) 5
sot00280 Valine, leucine and isoleucine degradation 4
sot00650 Butanoate metabolism 4
sot01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 7
sot01200 Carbon metabolism 5
sot00020 Citrate cycle (TCA cycle) 5
sot00620 Pyruvate metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 8
nta00020 Citrate cycle (TCA cycle) 6
nta00280 Valine, leucine and isoleucine degradation 3
nta00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 8
nta00900 Terpenoid backbone biosynthesis 7
nta00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 8
nta00020 Citrate cycle (TCA cycle) 6
nta04146 Peroxisome 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01250 Biosynthesis of nucleotide sugars 5
zma00020 Citrate cycle (TCA cycle) 4
zma00541 Biosynthesis of various nucleotide sugars 3
zma00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 12
tae00061 Fatty acid biosynthesis 4
tae00620 Pyruvate metabolism 4
tae00640 Propanoate metabolism 4
tae01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 12
tae00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 11
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 2
hvu00270 Cysteine and methionine metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 5
sbi01250 Biosynthesis of nucleotide sugars 5
sbi04144 Endocytosis 3
sbi00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 3
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 6
cre00020 Citrate cycle (TCA cycle) 5
cre00630 Glyoxylate and dicarboxylate metabolism 5
cre00620 Pyruvate metabolism 3
cre01210 2-Oxocarboxylic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936129 107896593 107936128 819845 835006 103837286 103854601 111197906 106403002 106365855 102618571 100796266 100801407 100795745 100267071 7485903 7485824 11413900 101263147 101267503 102584948 102579671 107793546 107778993 107766682 4325777 103635086 100381760 123164448 123078214 123069747 123443551 123413670 110433903 100829187 5727439
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