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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121205071   uncharacterized LOC121205071 
 ghi-r.1   107953609   DNA (cytosine-5)-methyltransferase CMT3 
 ghi-r.1   107929437   DNA (cytosine-5)-methyltransferase CMT2 
 ghi-r.1   107921173   putative DNA (cytosine-5)-methyltransferase CMT1 
 ath-u.5   CMT2   chromomethylase 2 
 ath-u.5   CMT3   chromomethylase 3 
 bra-r.6   103873920   DNA (cytosine-5)-methyltransferase CMT3 
 bra-r.6   103871899   putative DNA (cytosine-5)-methyltransferase CMT1 
 bra-r.6   103857074   DNA (cytosine-5)-methyltransferase CMT2 
 bna-r.1   106349859   putative DNA (cytosine-5)-methyltransferase CMT1 
 bna-r.1   106423266   DNA (cytosine-5)-methyltransferase CMT2 
 cit-r.1   102609368   DNA (cytosine-5)-methyltransferase CMT2-like 
 cit-r.1   102618592   DNA (cytosine-5)-methyltransferase CMT3-like 
 cit-r.1   102617543   putative DNA (cytosine-5)-methyltransferase CMT1 
 gma-u.5   100799480   DNA (cytosine-5)-methyltransferase CMT3 
 gma-u.5   100818307   DNA (cytosine-5)-methyltransferase CMT2 
 gma-u.5   100798061   putative DNA (cytosine-5)-methyltransferase CMT1 
 vvi-u.5   104882030   DNA (cytosine-5)-methyltransferase CMT2-like 
 vvi-u.5   100252100   putative DNA (cytosine-5)-methyltransferase CMT1 
 vvi-u.5   100255190   DNA (cytosine-5)-methyltransferase CMT2 
 ppo-u.5   7483264   DNA (cytosine-5)-methyltransferase CMT3 
 ppo-u.5   18096996   DNA (cytosine-5)-methyltransferase CMT2 
 mtr-u.5   25501554   DNA (cytosine-5)-methyltransferase CMT2 
 mtr-u.5   25496971   DNA (cytosine-5)-methyltransferase CMT3 
 mtr-u.5   25497416   putative DNA (cytosine-5)-methyltransferase CMT1 
 sly-u.5   CMT4   DNA (cytosine-5)-methyltransferase 
 sly-u.5   CMT3   DNA (cytosine-5)-methyltransferase 3 
 sly-u.5   CMT2   DNA (cytosine-5)-methyltransferase CMT2 
 sot-r.1   102589952   DNA (cytosine-5)-methyltransferase CMT2-like 
 sot-r.1   102580641   DNA (cytosine-5)-methyltransferase 1 
 nta-r.1   107762306   DNA (cytosine-5)-methyltransferase CMT2 
 nta-r.1   107770918   DNA (cytosine-5)-methyltransferase CMT3 
 nta-r.1   107774010   DNA (cytosine-5)-methyltransferase CMT3 
 osa-u.5   4338140   DNA (cytosine-5)-methyltransferase CMT2-like 
 osa-u.5   4347954   DNA (cytosine-5)-methyltransferase CMT3-like 
 zma-u.5   met5   DNA methyl transferase5 
 zma-u.5   met2   DNA methyltransferase2 
 tae-r.2   123085496   DNA (cytosine-5)-methyltransferase CMT2 
 tae-r.2   123131626   DNA (cytosine-5)-methyltransferase CMT3 
 hvu-r.1   123400990   DNA (cytosine-5)-methyltransferase 1-like 
 hvu-r.1   123448977   DNA (cytosine-5)-methyltransferase CMT2-like 
 sbi-r.1   8058269   DNA (cytosine-5)-methyltransferase CMT2 
 sbi-r.1   8063966   DNA (cytosine-5)-methyltransferase 1 
 sbi-r.1   8055427   DNA (cytosine-5)-methyltransferase 1 
 bdi-r.1   100823231   DNA (cytosine-5)-methyltransferase CMT2 
 bdi-r.1   100845813   DNA (cytosine-5)-methyltransferase CMT3 

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Top 50 coexpressed genes to 121205071 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121205071 (ghi-r.1 coexpression data)

CoexMap"121205071"


ghiLOC121205071 | Entrez gene ID : 121205071    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 3 3 3 2 3 3 2 3 2 2 2 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040931931.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_040931931.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_040931931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121205071
ghi-r.1
for
107953609
ghi-r.1
for
107929437
ghi-r.1
for
107921173
ath-u.5
for
CMT2
ath-u.5
for
CMT3
bra-r.6
for
103873920
bra-r.6
for
103871899
bra-r.6
for
103857074
bna-r.1
for
106349859
bna-r.1
for
106423266
cit-r.1
for
102609368
cit-r.1
for
102618592
cit-r.1
for
102617543
gma-u.5
for
100799480
gma-u.5
for
100818307
gma-u.5
for
100798061
vvi-u.5
for
104882030
vvi-u.5
for
100252100
vvi-u.5
for
100255190
ppo-u.5
for
7483264
ppo-u.5
for
18096996
mtr-u.5
for
25501554
mtr-u.5
for
25496971
mtr-u.5
for
25497416
sly-u.5
for
CMT4
sly-u.5
for
CMT3
sly-u.5
for
CMT2
sot-r.1
for
102589952
sot-r.1
for
102580641
nta-r.1
for
107762306
nta-r.1
for
107770918
nta-r.1
for
107774010
osa-u.5
for
4338140
osa-u.5
for
4347954
zma-u.5
for
met5
zma-u.5
for
met2
tae-r.2
for
123085496
tae-r.2
for
123131626
hvu-r.1
for
123400990
hvu-r.1
for
123448977
sbi-r.1
for
8058269
sbi-r.1
for
8063966
sbi-r.1
for
8055427
bdi-r.1
for
100823231
bdi-r.1
for
100845813


Ortholog ID: 1467
Species ghi ghi ghi ath ath bra bra bra bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa zma zma tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC121205071 LOC107929437 LOC107921173 CMT2 CMT3 LOC103873920 LOC103871899 LOC103857074 LOC106349859 LOC106357856 LOC102609368 LOC102618592 LOC102617543 LOC100818307 LOC100798061 LOC100817688 LOC104882030 LOC100252100 LOC100249359 LOC7483264 LOC18096996 LOC25497416 LOC25496870 LOC25491491 CMT4 CMT3 CMT2 LOC102589952 LOC102580641 LOC107762306 LOC107770918 LOC107774010 LOC4338140 LOC4347954 met5 met2 LOC123092546 LOC123400990 LOC123448977 LOC8058269 LOC8063966 LOC8055427 LOC100823231 LOC100845808
Function* uncharacterized LOC121205071 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 chromomethylase 2 chromomethylase 3 DNA (cytosine-5)-methyltransferase CMT3 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT3-like putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2-like putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase DNA (cytosine-5)-methyltransferase 3 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT3-like DNA methyl transferase5 DNA methyltransferase2 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase 1-like DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03082 ATP-dependent chromatin remodeling 3
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00591 Linoleic acid metabolism 3
bra00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03420 Nucleotide excision repair 3
bna03430 Mismatch repair 3
bna00270 Cysteine and methionine metabolism 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 4
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr00270 Cysteine and methionine metabolism 3
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 4
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 5
mtr00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 3
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly00270 Cysteine and methionine metabolism 2
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 3
sot00620 Pyruvate metabolism 3
sot01200 Carbon metabolism 3
sot01212 Fatty acid metabolism 3
sot00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma00270 Cysteine and methionine metabolism 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma00270 Cysteine and methionine metabolism 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
sbi04120 Ubiquitin mediated proteolysis 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 3
sbi00270 Cysteine and methionine metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03030 DNA replication 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi03082 ATP-dependent chromatin remodeling 4
bdi00270 Cysteine and methionine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121205071 107929437 107921173 827640 843313 103873920 103871899 103857074 106349859 106357856 102609368 102618592 102617543 100818307 100798061 100817688 104882030 100252100 100249359 7483264 18096996 25497416 25496870 25491491 101244018 101265056 101267211 102589952 102580641 107762306 107770918 107774010 4338140 4347954 542060 541827 123092546 123400990 123448977 8058269 8063966 8055427 100823231 100845808
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