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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  121209878  DNA ligase 1 
 ghi-r.1  107936309  DNA ligase 1 
 ghi-r.1  107921750  putative uncharacterized protein DDB_G0271982 
 ghi-r.1  107898155  nucleolar protein 58-like 
 cit-r.1  102626892  uncharacterized LOC102626892 
 gma-u.5  100778761  myb-like protein X 
 gma-u.5  100798848  DNA ligase 1 
 vvi-u.5  100259905  vicilin-like seed storage protein At2g18540 
 mtr-u.5  11446392  protein PXR1 
 mtr-u.5  25495862  protein PXR1 
 sly-u.5  101265598  uncharacterized LOC101265598 
 sot-r.1  102591276  ABC transporter F family member 4-like 
 nta-r.1  107815713  uncharacterized LOC107815713 

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Top 50 coexpressed genes to 121209878 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121209878 (ghi-r.1 coexpression data)

CoexMap"121209878"


ghiLOC121209878 | Entrez gene ID : 121209878
Species ghi cit gma vvi mtr sly sot nta bdi osa tae bna ppo zma cre sbi bra ath hvu
Paralog 4 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040937670.1 [sequence] [blastp]
XP_040937671.1 [sequence] [blastp]
XP_040937672.1 [sequence] [blastp]
XP_040937673.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040937670.1)
cyto 6,  nucl 2,  chlo 1  (predict for XP_040937671.1)
nucl 9,  cyto 1,  extr 1  (predict for XP_040937672.1)
nucl 9,  cyto 1,  extr 1  (predict for XP_040937673.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_040937670.1)
mito 6,  other 4  (predict for XP_040937671.1)
other 9  (predict for XP_040937672.1)
other 9  (predict for XP_040937673.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
121209878


ghi-r.1
for
107936309


ghi-r.1
for
107921750


ghi-r.1
for
107898155


cit-r.1
for
102626892


gma-u.5
for
100778761


gma-u.5
for
100798848


vvi-u.5
for
100259905


mtr-u.5
for
11446392


mtr-u.5
for
25495862


sly-u.5
for
101265598


sot-r.1
for
102591276


nta-r.1
for
107815713



Ortholog ID: 13352
Species ghi ghi ghi cit gma gma vvi mtr mtr sly sot nta
Symbol LOC121209878 LOC107898155 LOC107898154 LOC102626892 LOC100778761 LOC100798848 LOC100259905 LOC11446392 LOC25495862 LOC101265598 LOC102591276 LOC107815713
Function* DNA ligase 1 nucleolar protein 58-like uncharacterized LOC107898154 uncharacterized LOC102626892 myb-like protein X DNA ligase 1 vicilin-like seed storage protein At2g18540 protein PXR1 protein PXR1 uncharacterized LOC101265598 ABC transporter F family member 4-like uncharacterized LOC107815713
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121209878 107898155 107898154 102626892 100778761 100798848 100259905 11446392 25495862 101265598 102591276 107815713
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