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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121215508   protein ROOT INITIATION DEFECTIVE 3 
 ghi-r.1   107941239   protein ROOT INITIATION DEFECTIVE 3 
 mtr-u.5   11407455   protein ROOT INITIATION DEFECTIVE 3 

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Top 50 coexpressed genes to 121215508 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121215508 (ghi-r.1 coexpression data)

CoexMap"121215508"


ghiLOC121215508 | Entrez gene ID : 121215508    
Species ghi mtr vvi bdi bna ppo sbi gma cit hvu sot sly nta osa tae zma cre ath bra
Paralog 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006261 [list] [network] DNA-templated DNA replication  (183 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (477 genes)  IEA  
GO CC
GO:0005656 [list] [network] nuclear pre-replicative complex  (9 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040946145.1 [sequence] [blastp]
XP_040946146.1 [sequence] [blastp]
XP_040946147.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_040946145.1)
cyto 4,  nucl 4,  chlo 1,  mito 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_040946146.1)
nucl 7,  cyto 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_040946147.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040946145.1)
other 9  (predict for XP_040946146.1)
other 9  (predict for XP_040946147.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121215508
ghi-r.1
for
107941239
mtr-u.5
for
11407455


Ortholog ID: 17648
Species ghi ghi mtr
Symbol LOC121215508 LOC107941239 LOC11407455
Function* protein ROOT INITIATION DEFECTIVE 3 protein ROOT INITIATION DEFECTIVE 3 protein ROOT INITIATION DEFECTIVE 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121215508 107941239 11407455
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