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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929255   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 ath-u.5   AT3G06520   agenet domain-containing protein 
 ath-u.5   AT1G09320   agenet domain-containing protein 
 bra-r.6   103843357   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 bra-r.6   103871658   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 bna-r.1   111197972   protein AGENET DOMAIN (AGD)-CONTAINING P1-like 
 bna-r.1   106346282   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 bna-r.1   106377004   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 cit-r.1   102630729   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 gma-u.5   100805605   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 vvi-u.5   100266586   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 ppo-u.5   18098562   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 ppo-u.5   18104007   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 mtr-u.5   25484707   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 sly-u.5   101259666   protein AGENET DOMAIN (AGD)-CONTAINING P1-like 
 sly-u.5   101255538   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 sly-u.5   101259364   protein AGENET DOMAIN (AGD)-CONTAINING P1-like 
 sot-r.1   102580710   uncharacterized LOC102580710 
 sot-r.1   102593605   uncharacterized LOC102593605 
 nta-r.1   107763315   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 nta-r.1   107830650   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 nta-r.1   107769762   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 osa-u.5   4337716   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 zma-u.5   100285586   RNA binding protein 
 tae-r.2   123110296   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 tae-r.2   123180315   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 tae-r.2   123189934   protein AGENET DOMAIN (AGD)-CONTAINING P1 
 hvu-r.1   123418043   protein AGENET DOMAIN (AGD)-CONTAINING P1-like 
 sbi-r.1   8071278   DUF724 domain-containing protein 3 
 bdi-r.1   100841839   DUF724 domain-containing protein 3 

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Top 50 coexpressed genes to 107929255 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929255 (ghi-r.1 coexpression data)

CoexMap"121215596"


ghiLOC121215596 | Entrez gene ID : 121215596    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 2 3 1 1 1 2 1 3 2 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040946430.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  pero 1,  cyto_plas 1  (predict for XP_040946430.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040946430.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929255
ath-u.5
for
AT3G06520
ath-u.5
for
AT1G09320
bra-r.6
for
103843357
bra-r.6
for
103871658
bna-r.1
for
111197972
bna-r.1
for
106346282
bna-r.1
for
106377004
cit-r.1
for
102630729
gma-u.5
for
100805605
vvi-u.5
for
100266586
ppo-u.5
for
18098562
ppo-u.5
for
18104007
mtr-u.5
for
25484707
sly-u.5
for
101259666
sly-u.5
for
101255538
sly-u.5
for
101259364
sot-r.1
for
102580710
sot-r.1
for
102593605
nta-r.1
for
107763315
nta-r.1
for
107830650
nta-r.1
for
107769762
osa-u.5
for
4337716
zma-u.5
for
100285586
tae-r.2
for
123110296
tae-r.2
for
123180315
tae-r.2
for
123189934
hvu-r.1
for
123418043
sbi-r.1
for
8071278
bdi-r.1
for
100841839


Ortholog ID: 3328
Species ath ath bra bra bna bna bna cit gma vvi ppo ppo mtr sly sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G06520 AT1G09320 LOC103843357 LOC103871658 LOC111197972 LOC106346282 LOC106420238 LOC102630729 LOC100805605 LOC100266586 LOC18098562 LOC18104007 LOC25484707 LOC101259666 LOC101255538 LOC101259364 LOC102580710 LOC102593605 LOC107763315 LOC107830650 LOC107769762 LOC4337716 LOC100285586 LOC123110296 LOC123180315 LOC123189934 LOC123418043 LOC8071278 LOC100841839
Function* agenet domain-containing protein agenet domain-containing protein protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1-like protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1-like protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1-like protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1-like uncharacterized LOC102580710 uncharacterized LOC102593605 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 RNA binding protein protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1 protein AGENET DOMAIN (AGD)-CONTAINING P1-like DUF724 domain-containing protein 3 DUF724 domain-containing protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00260 Glycine, serine and threonine metabolism 4
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath00670 One carbon pool by folate 4
ath01200 Carbon metabolism 4
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03030 DNA replication 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03030 DNA replication 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03410 Base excision repair 3
tae03018 RNA degradation 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819830 837453 103843357 103871658 111197972 106346282 106420238 102630729 100805605 100266586 18098562 18104007 25484707 101259666 101255538 101259364 102580710 102593605 107763315 107830650 107769762 4337716 100285586 123110296 123180315 123189934 123418043 8071278 100841839
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