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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121215948   3-isopropylmalate dehydratase small subunit 1 
 ath-u.5   AT2G43090   Aconitase/3-isopropylmalate dehydratase protein 
 ath-u.5   IPMI1   isopropylmalate isomerase 1 
 gma-u.5   100809737   3-isopropylmalate dehydratase small subunit 1 
 gma-u.5   100782688   3-isopropylmalate dehydratase small subunit 1 
 vvi-u.5   100241307   3-isopropylmalate dehydratase small subunit-like 
 ppo-u.5   7465501   3-isopropylmalate dehydratase small subunit 1 
 mtr-u.5   25491331   3-isopropylmalate dehydratase small subunit 1 
 sly-u.5   101250813   3-isopropylmalate dehydratase small subunit 1 
 osa-u.5   4330192   3-isopropylmalate dehydratase small subunit 1 
 zma-u.5   100286245   3-isopropylmalate dehydratase small subunit 2 

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Top 50 coexpressed genes to 121215948 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121215948 (ghi-r.1 coexpression data)

CoexMap"121215948"


ghiLOC121215948 | Entrez gene ID : 121215948    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00290 [list] [network] Valine, leucine and isoleucine biosynthesis (50 genes)
ghi00660 [list] [network] C5-Branched dibasic acid metabolism (22 genes)
ghi01210 [list] [network] 2-Oxocarboxylic acid metabolism (211 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO CC
GO MF
GO:0016836 [list] [network] hydro-lyase activity  (176 genes)  IEA  
Protein XP_040946820.1 [sequence] [blastp]
XP_040946821.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_040946820.1)
chlo 9  (predict for XP_040946821.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_040946820.1)
chlo 9  (predict for XP_040946821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121215948
ath-u.5
for
AT2G43090
ath-u.5
for
IPMI1
gma-u.5
for
100809737
gma-u.5
for
100782688
vvi-u.5
for
100241307
ppo-u.5
for
7465501
mtr-u.5
for
25491331
sly-u.5
for
101250813
osa-u.5
for
4330192
zma-u.5
for
100286245


Ortholog ID: 6847
Species ghi ghi ath ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107898889 LOC121214804 AT2G43090 IPMI1 LOC103866694 LOC106421017 LOC106384003 LOC102622858 LOC100809737 LOC100782688 LOC100241307 LOC7465501 LOC25491331 LOC101250813 LOC102596097 LOC107827504 LOC107827507 LOC4330192 LOC100286245 LOC123144990 LOC123127898 LOC123402876 LOC8073966 LOC100844678 CHLRE_06g252650v5
Function* 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 Aconitase/3-isopropylmalate dehydratase protein isopropylmalate isomerase 1 3-isopropylmalate dehydratase small subunit 3 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 3-like 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 2 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 3 3-isopropylmalate dehydratase small subunit 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00660 C5-Branched dibasic acid metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00660 C5-Branched dibasic acid metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 12
ath01210 2-Oxocarboxylic acid metabolism 4
ath00300 Lysine biosynthesis 4
ath00220 Arginine biosynthesis 3
ath00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 9
ath01210 2-Oxocarboxylic acid metabolism 9
ath00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01230 Biosynthesis of amino acids 3
cit01210 2-Oxocarboxylic acid metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma03050 Proteasome 4
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01210 2-Oxocarboxylic acid metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 5
mtr01200 Carbon metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly00290 Valine, leucine and isoleucine biosynthesis 2
sly00660 C5-Branched dibasic acid metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot01200 Carbon metabolism 3
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00660 C5-Branched dibasic acid metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00660 C5-Branched dibasic acid metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01210 2-Oxocarboxylic acid metabolism 5
zma01230 Biosynthesis of amino acids 5
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma00660 C5-Branched dibasic acid metabolism 4
zma00966 Glucosinolate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00290 Valine, leucine and isoleucine biosynthesis 8
tae01210 2-Oxocarboxylic acid metabolism 8
tae00660 C5-Branched dibasic acid metabolism 5
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00290 Valine, leucine and isoleucine biosynthesis 9
tae01210 2-Oxocarboxylic acid metabolism 9
tae00660 C5-Branched dibasic acid metabolism 6
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu01230 Biosynthesis of amino acids 4
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 5
bdi01210 2-Oxocarboxylic acid metabolism 4
bdi00190 Oxidative phosphorylation 3
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre00561 Glycerolipid metabolism 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107898889 121214804 818911 825068 103866694 106421017 106384003 102622858 100809737 100782688 100241307 7465501 25491331 101250813 102596097 107827504 107827507 4330192 100286245 123144990 123127898 123402876 8073966 100844678 5722169
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