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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121219294   transcription factor bHLH137 
 ghi-r.1   121232026   transcription factor bHLH137 
 ghi-r.1   107946880   transcription factor bHLH137 
 ghi-r.1   107946607   transcription factor bHLH137 
 ath-u.5   AT5G50915   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103857259   transcription factor bHLH137 
 bna-r.1   106387525   transcription factor bHLH137 
 bna-r.1   106385355   transcription factor bHLH137-like 
 cit-r.1   102577992   putative bHLH transcription factor 
 gma-u.5   100796018   transcription factor bHLH137 
 vvi-u.5   100266054   basic helix-loop-helix protein 80 
 vvi-u.5   100268131   transcription factor bHLH137-like 
 mtr-u.5   25491151   transcription factor bHLH137 
 mtr-u.5   11433206   transcription factor bHLH137 
 sly-u.5   bHLH1   basic helix-loop-helix 
 sot-r.1   102596080   transcription factor bHLH137-like 
 nta-r.1   107813550   transcription factor BC1-like 
 nta-r.1   107805224   transcription factor bHLH137-like 
 osa-u.5   4347540   transcription factor bHLH137 
 osa-u.5   4337537   basic helix-loop-helix protein 80 
 osa-u.5   4346166   transcription factor bHLH137 
 zma-u.5   100502330   uncharacterized LOC100502330 
 zma-u.5   100282732   uncharacterized LOC100282732 
 zma-u.5   100194274   uncharacterized LOC100194274 
 tae-r.2   123125133   transcription factor bHLH137 
 tae-r.2   123154081   transcription factor bHLH137 
 sbi-r.1   8060932   transcription factor bHLH137 
 sbi-r.1   8058982   transcription factor bHLH137 
 bdi-r.1   100831834   transcription factor bHLH76 
 bdi-r.1   100824416   transcription factor bHLH137 
 bdi-r.1   100822174   transcription factor BEE 1 

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Top 50 coexpressed genes to 121219294 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121219294 (ghi-r.1 coexpression data)

CoexMap"121219294"


ghiLOC121219294 | Entrez gene ID : 121219294    
Species ghi ath bra bna cit gma vvi mtr sly sot nta osa zma tae sbi bdi ppo cre hvu
Paralog 4 1 1 2 1 1 2 2 1 1 2 3 3 2 2 3 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_040953144.1 [sequence] [blastp]
XP_040953145.1 [sequence] [blastp]
XP_040953146.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  golg 2,  chlo 1,  cyto 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for XP_040953144.1)
nucl 9,  cyto_nucl 5  (predict for XP_040953145.1)
chlo 4,  golg 2,  golg_plas 2,  nucl 2,  plas 1,  chlo_mito 1  (predict for XP_040953146.1)
Subcellular
localization
TargetP
scret 6,  other 4  (predict for XP_040953144.1)
scret 6,  other 4  (predict for XP_040953145.1)
other 6,  mito 3  (predict for XP_040953146.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121219294
ghi-r.1
for
121232026
ghi-r.1
for
107946880
ghi-r.1
for
107946607
ath-u.5
for
AT5G50915
bra-r.6
for
103857259
bna-r.1
for
106387525
bna-r.1
for
106385355
cit-r.1
for
102577992
gma-u.5
for
100796018
vvi-u.5
for
100266054
vvi-u.5
for
100268131
mtr-u.5
for
25491151
mtr-u.5
for
11433206
sly-u.5
for
bHLH1
sot-r.1
for
102596080
nta-r.1
for
107813550
nta-r.1
for
107805224
osa-u.5
for
4347540
osa-u.5
for
4337537
osa-u.5
for
4346166
zma-u.5
for
100502330
zma-u.5
for
100282732
zma-u.5
for
100194274
tae-r.2
for
123125133
tae-r.2
for
123154081
sbi-r.1
for
8060932
sbi-r.1
for
8058982
bdi-r.1
for
100831834
bdi-r.1
for
100824416
bdi-r.1
for
100822174


Ortholog ID: 3631
Species ghi ghi ath bra bna bna cit gma gma vvi vvi mtr mtr sly sot nta nta osa osa osa zma zma zma tae tae sbi sbi bdi bdi bdi
Symbol LOC107946880 LOC107946607 AT5G50915 LOC103857259 LOC106387525 LOC106385355 LOC102577992 LOC100796018 LOC100806696 LOC100266054 LOC100268131 LOC25491151 LOC11433206 bHLH1 LOC102596080 LOC107813550 LOC107805224 LOC4347540 LOC4337537 LOC4346166 LOC100502330 LOC100282732 LOC100193179 LOC123125133 LOC123107385 LOC8060932 LOC8058982 LOC100831834 LOC100824416 LOC100822174
Function* transcription factor bHLH137 transcription factor bHLH137 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH137 transcription factor bHLH137 transcription factor bHLH137-like putative bHLH transcription factor transcription factor bHLH137 transcription factor bHLH137 basic helix-loop-helix protein 80 transcription factor bHLH137-like transcription factor bHLH137 transcription factor bHLH137 basic helix-loop-helix transcription factor bHLH137-like transcription factor BC1-like transcription factor bHLH137-like transcription factor bHLH137 basic helix-loop-helix protein 80 transcription factor bHLH137 uncharacterized LOC100502330 uncharacterized LOC100282732 uncharacterized LOC100193179 transcription factor bHLH137 transcription factor bHLH137 transcription factor bHLH137 transcription factor bHLH137 transcription factor bHLH76 transcription factor bHLH137 transcription factor BEE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 2
bra00460 Cyanoamino acid metabolism 2
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04142 Lysosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 6
gma01230 Biosynthesis of amino acids 4
gma00630 Glyoxylate and dicarboxylate metabolism 4
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 3
tae04146 Peroxisome 3
tae00062 Fatty acid elongation 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946880 107946607 835164 103857259 106387525 106385355 102577992 100796018 100806696 100266054 100268131 25491151 11433206 101055586 102596080 107813550 107805224 4347540 4337537 4346166 100502330 100282732 100193179 123125133 123107385 8060932 8058982 100831834 100824416 100822174
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