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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107954172  cyclin-dependent protein kinase inhibitor SMR2 
 ath-u.5  AT1G08180  cyclin-dependent kinase inhibitor 
 bra-r.6  103871566  cyclin-dependent protein kinase inhibitor SMR2 
 bra-r.6  103836402  cyclin-dependent protein kinase inhibitor SMR2 
 bna-r.1  106351196  cyclin-dependent protein kinase inhibitor SMR2-like 
 bna-r.1  106413721  cyclin-dependent protein kinase inhibitor SMR2 
 cit-r.1  102620005  uncharacterized LOC102620005 
 cit-r.1  107178325  cyclin-dependent protein kinase inhibitor SMR2 
 gma-u.5  100785771  uncharacterized LOC100785771 
 gma-u.5  100804534  cyclin-dependent protein kinase inhibitor SMR1 
 vvi-u.5  104878241  cyclin-dependent protein kinase inhibitor SMR1 
 mtr-u.5  25484850  cyclin-dependent protein kinase inhibitor SMR2 

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Top 50 coexpressed genes to 107954172 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954172 (ghi-r.1 coexpression data)

CoexMap"121223548"


ghiLOC121223548 | Entrez gene ID : 121223548
Species ghi ath bra bna cit gma vvi mtr sbi osa sot sly tae hvu ppo zma cre nta bdi
Paralog 1 1 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032875 [list] [network] regulation of DNA endoreduplication  (28 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
Protein XP_040961176.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_040961176.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040961176.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107954172


ath-u.5
for
AT1G08180


bra-r.6
for
103871566


bra-r.6
for
103836402


bna-r.1
for
106351196


bna-r.1
for
106413721


cit-r.1
for
102620005


cit-r.1
for
107178325


gma-u.5
for
100785771


gma-u.5
for
100804534


vvi-u.5
for
104878241


mtr-u.5
for
25484850



Ortholog ID: 13472
Species ghi ath bra bra bna bna cit cit gma gma vvi mtr
Symbol LOC107954172 AT1G08180 LOC103871566 LOC103836402 LOC106351196 LOC106413721 LOC102620005 LOC107178325 LOC100785771 LOC100804534 LOC104878241 LOC25484850
Function* cyclin-dependent protein kinase inhibitor SMR2 cyclin-dependent kinase inhibitor cyclin-dependent protein kinase inhibitor SMR2 cyclin-dependent protein kinase inhibitor SMR2 cyclin-dependent protein kinase inhibitor SMR2-like cyclin-dependent protein kinase inhibitor SMR2 uncharacterized LOC102620005 cyclin-dependent protein kinase inhibitor SMR2 uncharacterized LOC100785771 cyclin-dependent protein kinase inhibitor SMR1 cyclin-dependent protein kinase inhibitor SMR1 cyclin-dependent protein kinase inhibitor SMR2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00650 Butanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954172 837339 103871566 103836402 106351196 106413721 102620005 107178325 100785771 100804534 104878241 25484850
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