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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121225243   E3 ubiquitin-protein ligase ZNRF3 
 ghi-r.1   107929821   probable E3 ubiquitin-protein ligase RHY1A 
 ghi-r.1   107909580   probable E3 ubiquitin-protein ligase RHY1A 
 ghi-r.1   107938031   E3 ubiquitin-protein ligase ZNRF3 
 ath-u.5   AT2G15580   RING/U-box superfamily protein 
 bra-r.6   103844355   probable E3 ubiquitin-protein ligase RHY1A 
 bna-r.1   106445638   probable E3 ubiquitin-protein ligase RHY1A 
 bna-r.1   111204018   uncharacterized LOC111204018 
 bna-r.1   106361630   probable E3 ubiquitin-protein ligase RHY1A 
 cit-r.1   102616965   probable E3 ubiquitin-protein ligase RHY1A 
 gma-u.5   100790524   probable E3 ubiquitin-protein ligase RHY1A 
 gma-u.5   100527583   uncharacterized LOC100527583 
 gma-u.5   100500350   uncharacterized LOC100500350 
 vvi-u.5   100241393   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   7470041   probable E3 ubiquitin-protein ligase RHY1A 
 mtr-u.5   25488383   probable E3 ubiquitin-protein ligase RHY1A 
 sly-u.5   101250706   probable E3 ubiquitin-protein ligase RHY1A 
 sot-r.1   102590705   uncharacterized LOC102590705 
 sot-r.1   102590358   E3 ubiquitin-protein ligase RING1-like 
 nta-r.1   107801626   uncharacterized LOC107801626 
 nta-r.1   107776374   uncharacterized LOC107776374 
 osa-u.5   4331022   uncharacterized LOC4331022 
 osa-u.5   4340307   receptor homology region, transmembrane domain- and RING domain-containing protein 6 
 zma-u.5   100283924   uncharacterized LOC100283924 
 zma-u.5   103627863   RING/U-box superfamily protein 
 tae-r.2   123139174   probable E3 ubiquitin-protein ligase RHY1A 
 tae-r.2   123145938   probable E3 ubiquitin-protein ligase HIP1 
 hvu-r.1   123405448   probable E3 ubiquitin-protein ligase RHY1A 
 hvu-r.1   123412783   E3 ubiquitin-protein ligase TTC3-like 
 sbi-r.1   8056392   RING-H2 finger protein ATL80 
 sbi-r.1   110431252   E3 ubiquitin-protein ligase RLIM-like 
 bdi-r.1   100833275   probable E3 ubiquitin-protein ligase RHY1A 
 bdi-r.1   100830912   uncharacterized LOC100830912 

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Top 50 coexpressed genes to 121225243 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121225243 (ghi-r.1 coexpression data)

CoexMap"121225243"


ghiLOC121225243 | Entrez gene ID : 121225243    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 1 3 1 1 1 1 2 2 2 2 2 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1428 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
Protein XP_040965402.1 [sequence] [blastp]
XP_040965403.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cyto_nucl 3  (predict for XP_040965402.1)
nucl 4,  mito 3,  chlo 2,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for XP_040965403.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_040965402.1)
mito 8  (predict for XP_040965403.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121225243
ghi-r.1
for
107929821
ghi-r.1
for
107909580
ghi-r.1
for
107938031
ath-u.5
for
AT2G15580
bra-r.6
for
103844355
bna-r.1
for
106445638
bna-r.1
for
111204018
bna-r.1
for
106361630
cit-r.1
for
102616965
gma-u.5
for
100790524
gma-u.5
for
100527583
gma-u.5
for
100500350
vvi-u.5
for
100241393
ppo-u.5
for
7470041
mtr-u.5
for
25488383
sly-u.5
for
101250706
sot-r.1
for
102590705
sot-r.1
for
102590358
nta-r.1
for
107801626
nta-r.1
for
107776374
osa-u.5
for
4331022
osa-u.5
for
4340307
zma-u.5
for
100283924
zma-u.5
for
103627863
tae-r.2
for
123139174
tae-r.2
for
123145938
hvu-r.1
for
123405448
hvu-r.1
for
123412783
sbi-r.1
for
8056392
sbi-r.1
for
110431252
bdi-r.1
for
100833275
bdi-r.1
for
100830912


Ortholog ID: 3901
Species ghi ghi ghi ath bra bna bna bna cit gma gma gma vvi ppo mtr sly sot sot nta nta nta osa osa zma zma tae tae hvu hvu hvu sbi sbi bdi bdi
Symbol LOC121225243 LOC107909580 LOC107962551 AT2G15580 LOC103844355 LOC106445638 LOC111204018 LOC106361630 LOC102616965 LOC100790524 LOC100527583 LOC100500350 LOC100241393 LOC7470041 LOC25488383 LOC101250706 LOC102590705 LOC102590358 LOC107801626 LOC107776374 LOC107759976 LOC4331022 LOC4340307 LOC100283924 LOC103627863 LOC123139174 LOC123165795 LOC123405448 LOC123412783 LOC123402617 LOC8056392 LOC110431252 LOC100833275 LOC100830912
Function* E3 ubiquitin-protein ligase ZNRF3 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC107962551 RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC111204018 probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC100527583 uncharacterized LOC100500350 probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC102590705 E3 ubiquitin-protein ligase RING1-like uncharacterized LOC107801626 uncharacterized LOC107776374 uncharacterized LOC107759976 uncharacterized LOC4331022 receptor homology region, transmembrane domain- and RING domain-containing protein 6 uncharacterized LOC100283924 RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase Iruka probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase TTC3-like uncharacterized LOC123402617 RING-H2 finger protein ATL80 E3 ubiquitin-protein ligase RLIM-like probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC100830912
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 3
ghi00061 Fatty acid biosynthesis 2
ghi01212 Fatty acid metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04016 MAPK signaling pathway - plant 2
nta04070 Phosphatidylinositol signaling system 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta04070 Phosphatidylinositol signaling system 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121225243 107909580 107962551 816051 103844355 106445638 111204018 106361630 102616965 100790524 100527583 100500350 100241393 7470041 25488383 101250706 102590705 102590358 107801626 107776374 107759976 4331022 4340307 100283924 103627863 123139174 123165795 123405448 123412783 123402617 8056392 110431252 100833275 100830912
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