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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121229239   dehydration-responsive element-binding protein 3 
 ath-u.5   TINY2   Integrase-type DNA-binding superfamily protein 
 ath-u.5   ERF38   ERF family protein 38 
 gma-u.5   AP2-1   dehydration-responsive element-binding protein 3-like 
 vvi-u.5   100243009   dehydration-responsive element-binding protein 3 
 vvi-u.5   100249652   ethylene-responsive transcription factor ERF038 
 vvi-u.5   100252531   dehydration-responsive element-binding protein 3 
 ppo-u.5   7453934   ethylene-responsive transcription factor ERF038 
 mtr-u.5   11442235   ethylene-responsive transcription factor ERF034 
 mtr-u.5   11436276   ethylene-responsive transcription factor ERF034 
 sly-u.5   ERF-H5   ethylene-responsive transcription factor 4 
 sly-u.5   ERF-H7   ethylene response factor H.7 
 osa-u.5   4330203   ethylene-responsive transcription factor ERF039 
 osa-u.5   107280052   ethylene-responsive transcription factor ERF039 
 zma-u.5   109943013   ethylene-responsive transcription factor ERF039 
 zma-u.5   103627503   ethylene-responsive transcription factor ERF039 

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Top 50 coexpressed genes to 121229239 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121229239 (ghi-r.1 coexpression data)

CoexMap"121229239"


ghiLOC121229239 | Entrez gene ID : 121229239    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 1 3 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_040968866.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_040968866.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_040968866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121229239
ath-u.5
for
TINY2
ath-u.5
for
ERF38
gma-u.5
for
AP2-1
vvi-u.5
for
100243009
vvi-u.5
for
100249652
vvi-u.5
for
100252531
ppo-u.5
for
7453934
mtr-u.5
for
11442235
mtr-u.5
for
11436276
sly-u.5
for
ERF-H5
sly-u.5
for
ERF-H7
osa-u.5
for
4330203
osa-u.5
for
107280052
zma-u.5
for
109943013
zma-u.5
for
103627503


Ortholog ID: 201
Species ghi ghi ath ath bra bna cit gma gma vvi vvi ppo ppo mtr mtr sly sot nta osa tae hvu hvu sbi bdi
Symbol LOC107929345 LOC107923204 TINY2 AT3G60490 LOC103869194 LOC106348553 LOC102611994 LOC100812293 LOC100784134 LOC100268038 LOC100249652 LOC18094599 LOC7462924 LOC11420693 LOC11442235 ERF-H8 LOC102589769 LOC107803926 LOC107280052 LOC123041822 LOC123430693 LOC123402106 LOC8085554 LOC100826141
Function* ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF038 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor TINY-like ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor TINY ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF038 ethylene-responsive transcription factor ERF039 dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF036 ethylene-responsive transcription factor ERF034 ethylene response factor H.8 ethylene-responsive transcription factor ERF034-like dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039-like ethylene-responsive transcription factor ERF038-like ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF039
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00562 Inositol phosphate metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 3
hvu04517 IgSF CAM signaling 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 5
hvu00062 Fatty acid elongation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929345 107923204 831031 825220 103869194 106348553 102611994 100812293 100784134 100268038 100249652 18094599 7462924 11420693 11442235 101254925 102589769 107803926 107280052 123041822 123430693 123402106 8085554 100826141
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