Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121229690   transcription elongation factor SPT6-like 
 ghi-r.1   107955350   transcription elongation factor SPT6 homolog 
 ghi-r.1   107923402   transcription elongation factor SPT6 homolog 
 ghi-r.1   107915200   transcription elongation factor SPT6 homolog 
 ath-u.5   AT1G63210   Transcription elongation factor Spt6 
 ath-u.5   GTB1   global transcription factor group B1 
 bra-r.6   103852235   transcription elongation factor SPT6 homolog 
 bra-r.6   103831054   transcription elongation factor SPT6 homolog 
 bna-r.1   106409019   transcription elongation factor SPT6 homolog 
 bna-r.1   106426271   transcription elongation factor SPT6 homolog 
 bna-r.1   125575113   transcription elongation factor SPT6 homolog 
 cit-r.1   102621404   transcription elongation factor SPT6 homolog 
 gma-u.5   100809136   transcription elongation factor SPT6 homolog 
 gma-u.5   100808591   transcription elongation factor SPT6 homolog 
 gma-u.5   100804204   transcription elongation factor SPT6-like 
 vvi-u.5   100241331   transcription elongation factor SPT6 homolog 
 ppo-u.5   7455790   transcription elongation factor SPT6 homolog 
 ppo-u.5   7464055   transcription elongation factor SPT6 homolog 
 ppo-u.5   7479639   transcription elongation factor SPT6 homolog 
 mtr-u.5   11433787   transcription elongation factor SPT6 homolog 
 mtr-u.5   11426983   transcription elongation factor SPT6 homolog 
 mtr-u.5   112420383   transcription elongation factor SPT6 homolog 
 sly-u.5   101250941   transcription elongation factor SPT6 homolog 
 sot-r.1   102584212   transcription elongation factor SPT6 
 nta-r.1   107791867   transcription elongation factor SPT6 homolog 
 nta-r.1   142181215   transcription elongation factor SPT6-like 
 osa-u.5   9270554   transcription elongation factor SPT6 homolog 
 zma-u.5   103630545   transcription elongation factor SPT6 homolog 
 tae-r.2   123137963   transcription elongation factor SPT6 homolog 
 tae-r.2   123182461   transcription elongation factor SPT6 homolog 
 tae-r.2   123060835   transcription elongation factor SPT6 homolog 
 hvu-r.1   123443934   transcription elongation factor SPT6 homolog 
 sbi-r.1   8077045   transcription elongation factor SPT6-like 
 bdi-r.1   100825683   transcription elongation factor SPT6-like 
 bdi-r.1   104581694   transcription elongation factor SPT6 homolog 
 bdi-r.1   100823557   transcription elongation factor SPT6-like 
 cre-r.1   CHLRE_09g403182v5   uncharacterized protein 

close


Top 50 coexpressed genes to 121229690 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 121229690 (ghi-r.1 coexpression data)

CoexMap"121229690"


ghiLOC121229690 | Entrez gene ID : 121229690    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 1 3 3 1 1 2 1 1 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0140673 [list] [network] transcription elongation-coupled chromatin remodeling  (22 genes)  IEA  
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (65 genes)  IEA  
GO:0034728 [list] [network] nucleosome organization  (113 genes)  IEA  
GO CC
GO:0008023 [list] [network] transcription elongation factor complex  (80 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (81 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_040970430.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_040970430.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040970430.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121229690
ghi-r.1
for
107955350
ghi-r.1
for
107923402
ghi-r.1
for
107915200
ath-u.5
for
AT1G63210
ath-u.5
for
GTB1
bra-r.6
for
103852235
bra-r.6
for
103831054
bna-r.1
for
106409019
bna-r.1
for
106426271
bna-r.1
for
125575113
cit-r.1
for
102621404
gma-u.5
for
100809136
gma-u.5
for
100808591
gma-u.5
for
100804204
vvi-u.5
for
100241331
ppo-u.5
for
7455790
ppo-u.5
for
7464055
ppo-u.5
for
7479639
mtr-u.5
for
11433787
mtr-u.5
for
11426983
mtr-u.5
for
112420383
sly-u.5
for
101250941
sot-r.1
for
102584212
nta-r.1
for
107791867
nta-r.1
for
142181215
osa-u.5
for
9270554
zma-u.5
for
103630545
tae-r.2
for
123137963
tae-r.2
for
123182461
tae-r.2
for
123060835
hvu-r.1
for
123443934
sbi-r.1
for
8077045
bdi-r.1
for
100825683
bdi-r.1
for
104581694
bdi-r.1
for
100823557
cre-r.1
for
CHLRE_09g403182v5


Ortholog ID: 4648
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma gma ppo ppo ppo mtr mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi bdi cre
Symbol LOC121229690 LOC107955350 LOC107896223 AT1G63210 GTB1 LOC103852235 LOC103831054 LOC106409019 LOC106426271 LOC106406465 LOC102621404 LOC100809136 LOC100808591 LOC100804204 LOC7455790 LOC7464055 LOC7479639 LOC11433787 LOC11426983 LOC112420383 LOC101250941 LOC102584212 LOC107791867 LOC142181215 LOC9270554 LOC103630545 LOC123137963 LOC123182461 LOC123060835 LOC123443934 LOC8077045 LOC100825683 LOC104581694 LOC100823557 CHLRE_09g403182v5
Function* transcription elongation factor SPT6-like transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog Transcription elongation factor Spt6 global transcription factor group B1 transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6-like transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 transcription elongation factor SPT6 homolog transcription elongation factor SPT6-like transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6 homolog transcription elongation factor SPT6-like transcription elongation factor SPT6-like transcription elongation factor SPT6 homolog transcription elongation factor SPT6-like uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03250 Viral life cycle - HIV-1 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03040 Spliceosome 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03040 Spliceosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03040 Spliceosome 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 5
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121229690 107955350 107896223 842626 842855 103852235 103831054 106409019 106426271 106406465 102621404 100809136 100808591 100804204 7455790 7464055 7479639 11433787 11426983 112420383 101250941 102584212 107791867 142181215 9270554 103630545 123137963 123182461 123060835 123443934 8077045 100825683 104581694 100823557 5723196
The preparation time of this page was 0.2 [sec].