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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107886806   transcription factor MYB36-like 
 ghi-r.1   107898980   transcription factor RAX3 
 ath-u.5   MYB68   myb domain protein 68 
 ath-u.5   MYB36   myb domain protein 36 
 ath-u.5   MYB84   myb domain protein 84 
 bra-r.6   103874017   transcription factor RAX3 
 bra-r.6   103873034   transcription factor RAX3 
 bra-r.6   103867245   transcription factor RAX2 
 bna-r.1   106444822   transcription factor RAX3-like 
 bna-r.1   106443519   transcription factor RAX2 
 bna-r.1   106436691   transcription factor MYB36 
 gma-u.5   100779919   transcription factor RAX2-like 
 gma-u.5   100820139   transcription factor RAX2 
 gma-u.5   100817747   transcription factor RAX2 
 vvi-u.5   100244588   transcription factor RAX3 
 mtr-u.5   11445817   transcription factor MYB36 
 mtr-u.5   25482019   transcription factor MYB36 
 mtr-u.5   11419694   transcription factor RAX3 
 sly-u.5   101261262   protein blind-like1 
 sly-u.5   101245617   transcription factor RAX3 
 sot-r.1   102605776   transcription factor RAX2 
 sot-r.1   102603425   transcription factor RAX1-like 
 nta-r.1   107805786   uncharacterized LOC107805786 
 nta-r.1   107821759   uncharacterized LOC107821759 
 nta-r.1   107816569   transcription factor MYB35-like 
 osa-u.5   4324664   transcription repressor MYB5 
 osa-u.5   4327303   transcription factor RAX2 
 zma-u.5   109944008   transcription factor RAX2 
 zma-u.5   103644077   transcription factor RAX3 
 zma-u.5   103651344   transcription factor MYB4 
 tae-r.2   123043420   transcription factor RAX2 
 tae-r.2   123058499   transcription factor RAX2 
 hvu-r.1   123452423   transcription factor MYB4-like 
 hvu-r.1   123440106   transcription factor RAX2-like 
 sbi-r.1   8066610   transcription factor RAX2 
 bdi-r.1   100835199   transcription factor RAX1 

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Top 50 coexpressed genes to 107886806 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886806 (ghi-r.1 coexpression data)

CoexMap"121231933"


ghiLOC121231933 | Entrez gene ID : 121231933    
Species ghi ath bra bna gma vvi mtr sly sot nta osa zma tae hvu sbi bdi ppo cre cit
Paralog 2 3 3 3 3 1 3 2 2 3 2 3 2 2 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_040973011.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_040973011.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040973011.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107886806
ghi-r.1
for
107898980
ath-u.5
for
MYB68
ath-u.5
for
MYB36
ath-u.5
for
MYB84
bra-r.6
for
103874017
bra-r.6
for
103873034
bra-r.6
for
103867245
bna-r.1
for
106444822
bna-r.1
for
106443519
bna-r.1
for
106436691
gma-u.5
for
100779919
gma-u.5
for
100820139
gma-u.5
for
100817747
vvi-u.5
for
100244588
mtr-u.5
for
11445817
mtr-u.5
for
25482019
mtr-u.5
for
11419694
sly-u.5
for
101261262
sly-u.5
for
101245617
sot-r.1
for
102605776
sot-r.1
for
102603425
nta-r.1
for
107805786
nta-r.1
for
107821759
nta-r.1
for
107816569
osa-u.5
for
4324664
osa-u.5
for
4327303
zma-u.5
for
109944008
zma-u.5
for
103644077
zma-u.5
for
103651344
tae-r.2
for
123043420
tae-r.2
for
123058499
hvu-r.1
for
123452423
hvu-r.1
for
123440106
sbi-r.1
for
8066610
bdi-r.1
for
100835199


Ortholog ID: 174
Species ghi ghi ghi ath ath ath bra bra bra bna bna cit gma vvi mtr mtr mtr sly sot sot nta nta nta osa osa zma zma hvu sbi sbi bdi bdi bdi
Symbol LOC107929872 LOC107938316 LOC107958549 MYB36 MYB84 RAX2 LOC103873034 LOC103867245 LOC103856743 LOC106444822 LOC106413853 LOC102616386 LOC100800290 LOC100267549 LOC25482019 LOC25482026 LOC25493540 LOC101263789 LOC102596369 LOC102587150 LOC142166818 LOC107808818 LOC107785742 LOC4324664 LOC4339548 LOC103651344 LOC100272412 LOC123452423 LOC8066610 LOC8074564 LOC100837419 LOC100831769 LOC100834402
Function* transcription factor MYB36 transcription factor RAX3-like transcription factor RAX2 myb domain protein 36 myb domain protein 84 Duplicated homeodomain-like superfamily protein transcription factor RAX3 transcription factor RAX2 transcription factor MYB36 transcription factor RAX3-like transcription factor RAX3-like transcription factor MYB87-like transcription factor RAX3 transcription factor RAX2 transcription factor MYB36 transcription factor RAX3 transcription factor RAX3 transcription factor MYB36-like transcription factor RAX2-like transcription factor RAX1 transcription factor RAX3-like uncharacterized LOC107808818 transcription factor RAX3-like transcription repressor MYB5 transcription factor MYB8 transcription factor MYB4 uncharacterized LOC100272412 transcription factor MYB4-like transcription factor RAX2 transcription factor RAX1 transcription factor RAX3 transcription factor RAX2 transcription factor MYB4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 8
ghi00941 Flavonoid biosynthesis 4
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 6
sly00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot02010 ABC transporters 2
sot04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 4
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
sbi04016 MAPK signaling pathway - plant 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00941 Flavonoid biosynthesis 2
sbi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929872 107938316 107958549 835866 824131 818262 103873034 103867245 103856743 106444822 106413853 102616386 100800290 100267549 25482019 25482026 25493540 101263789 102596369 102587150 142166818 107808818 107785742 4324664 4339548 103651344 100272412 123452423 8066610 8074564 100837419 100831769 100834402
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