ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123039039	DNA-directed RNA polymerase V subunit 7
tae-r.2	123113234	DNA-directed RNA polymerase V subunit 7
hvu-r.1	123426139	DNA-directed RNA polymerase V subunit 7-like
bdi-r.1	100842749	DNA-directed RNA polymerase V subunit 7
bdi-r.1	100836334	DNA-directed RNA polymerase V subunit 7
osa-u.5	107278405	DNA-directed RNA polymerase V subunit 7
osa-u.5	4337866	DNA-directed RNA polymerase V subunit 7
zma-u.5	100284005	uncharacterized LOC100284005
sbi-r.1	8071189	DNA-directed RNA polymerase V subunit 7
ath-u.5	NRPD7	RNA polymerase Rpb7-like, N-terminal domain-containing protein
ath-u.5	NRPE7	RNA polymerase Rpb7-like, N-terminal domain-containing protein
gma-u.5	100527862	uncharacterized LOC100527862
sly-u.5	101264710	DNA-directed RNA polymerase V subunit 7
bra-r.6	103834253	DNA-directed RNA polymerase IV subunit 7
bra-r.6	103833463	DNA-directed RNA polymerase V subunit 7
vvi-u.5	100261398	DNA-directed RNA polymerase II subunit RPB7-like
ppo-u.5	18102490	DNA-directed RNA polymerase V subunit 7
ppo-u.5	7473447	DNA-directed RNA polymerase V subunit 7
mtr-u.5	25485783	DNA-directed RNA polymerase V subunit 7
mtr-u.5	25484144	DNA-directed RNA polymerase V subunit 7
ghi-r.1	107904797	DNA-directed RNA polymerase V subunit 7
ghi-r.1	107904403	DNA-directed RNA polymerase V subunit 7
bna-r.1	106453721	DNA-directed RNA polymerase IV subunit 7-like
sot-r.1	102584688	DNA-directed RNA polymerase V subunit 7-like
sot-r.1	102590183	DNA-directed RNA polymerase V subunit 7-like
sot-r.1	102592607	DNA-directed RNA polymerase V subunit 7-like
cit-r.1	102629804	DNA-directed RNA polymerase V subunit 7
nta-r.1	107820955	DNA-directed RNA polymerase V subunit 7
nta-r.1	107807242	DNA-directed RNA polymerase V subunit 7-like

Top 50 coexpressed genes to 123039039 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123039039 (tae-r.2 coexpression data)

CoexMap"123039039"

[Cytoscape]

Annotation

functional annotation

KEGG

taes03020 [list] [network] RNA polymerase (173 genes)

GO BP

GO:0006352 [list] [network] DNA-templated transcription initiation	(277 genes)	IEA
GO:0006351 [list] [network] DNA-templated transcription	(790 genes)	IEA

GO CC

GO MF

GO:0003727 [list] [network] single-stranded RNA binding	(46 genes)	IEA
GO:0003697 [list] [network] single-stranded DNA binding	(212 genes)	IEA

Protein

XP_044318291.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, nucl 1, chlo 1, cysk 1, nucl_plas 1

(predict for XP_044318291.1)

Subcellular
localization
TargetP

other 6

(predict for XP_044318291.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123039039	tae-r.2 for 123113234	hvu-r.1 for 123426139	bdi-r.1 for 100842749	bdi-r.1 for 100836334	osa-u.5 for 107278405	osa-u.5 for 4337866	zma-u.5 for 100284005	sbi-r.1 for 8071189	ath-u.5 for NRPD7	ath-u.5 for NRPE7	gma-u.5 for 100527862	sly-u.5 for 101264710	bra-r.6 for 103834253	bra-r.6 for 103833463	vvi-u.5 for 100261398	ppo-u.5 for 18102490	ppo-u.5 for 7473447	mtr-u.5 for 25485783	mtr-u.5 for 25484144	ghi-r.1 for 107904797	ghi-r.1 for 107904403	bna-r.1 for 106453721	sot-r.1 for 102584688	sot-r.1 for 102590183	sot-r.1 for 102592607	cit-r.1 for 102629804	nta-r.1 for 107820955	nta-r.1 for 107807242

Ortholog

Ortholog ID: 4917

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NRPD7

NRPE7

Function^*