Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   ccmFn   cytochrome c biogenesis Fn 
 zma-u.5   118475999   probable cytochrome c biosynthesis protein 
 zma-u.5   118473882   probable cytochrome c biosynthesis protein 
 zma-u.5   118474039   probable cytochrome c biosynthesis protein 
 sbi-r.1   ccmFN   cytochrome c biogenesis FN 
 ath-u.5   ccmFN1   cytochrome c biogenesis FN1 
 sly-u.5   ccmFN   cytochrome c maturation protein CcmFN 
 vvi-u.5   ccmFN   CcmFN 
 mtr-u.5   ccmFn   cytochrome c biogenesis FN 
 ghi-r.1   ccmFN   cytochrome c biogenesis FN 
 sot-r.1   102585978   cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 
 cit-r.1   ccmFN   cytochrome c biogenesis FN 
 nta-r.1   ccmFN   cytochrome c maturation protein CcmFN 

close


Top 50 coexpressed genes to ccmFn (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to ccmFn (osa-u.5 coexpression data)

CoexMap"123039214"


taeLOC123039214 | Entrez gene ID : 123039214    
Species osa zma sbi ath sly vvi mtr ghi sot cit nta bdi tae bna ppo cre hvu gma bra
Paralog 1 3 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015886 [list] [network] heme transport  (19 genes)  IEA  
GO:0017004 [list] [network] cytochrome complex assembly  (74 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
GO:0015232 [list] [network] heme transmembrane transporter activity  (19 genes)  IEA  
GO:0020037 [list] [network] heme binding  (2231 genes)  IEA  
Protein XP_044318408.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  E.R. 1,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_044318408.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044318408.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
ccmFn
zma-u.5
for
118475999
zma-u.5
for
118473882
zma-u.5
for
118474039
sbi-r.1
for
ccmFN
ath-u.5
for
ccmFN1
sly-u.5
for
ccmFN
vvi-u.5
for
ccmFN
mtr-u.5
for
ccmFn
ghi-r.1
for
ccmFN
sot-r.1
for
102585978
cit-r.1
for
ccmFN
nta-r.1
for
ccmFN


Ortholog ID: 10577
Species osa zma zma zma sbi ath sly vvi mtr ghi sot cit nta
Symbol ccmFn LOC118474039 LOC118475790 LOC118473868 ccmFN ccmFN1 ccmFN ccmFN ccmFn ccmFN LOC102585978 ccmFN ccmFN
Function* cytochrome c biogenesis Fn probable cytochrome c biosynthesis protein probable cytochrome c biosynthesis protein probable cytochrome c biosynthesis protein cytochrome c biogenesis FN cytochrome c biogenesis FN1 cytochrome c maturation protein CcmFN CcmFN cytochrome c biogenesis FN cytochrome c biogenesis FN cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 cytochrome c biogenesis FN cytochrome c maturation protein CcmFN
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 9
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 11
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 12
vvi03010 Ribosome 6
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 14
mtr03010 Ribosome 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 12
ghi03010 Ribosome 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 12
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 6450192 118474039 118475790 118473868 4306040 36335671 34678314 7498641 26974319 24679517 102585978 36487007 3205368
The preparation time of this page was 0.1 [sec].