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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123044732   transmembrane E3 ubiquitin-protein ligase FLY1 
 osa-u.5   4343316   transmembrane E3 ubiquitin-protein ligase FLY2 
 zma-u.5   103633202   transmembrane E3 ubiquitin-protein ligase FLY2 
 ath-u.5   AT2G20650   RING/U-box superfamily protein 
 ath-u.5   AT4G28370   RING/U-box superfamily protein 
 gma-u.5   102667590   transmembrane E3 ubiquitin-protein ligase FLY1 
 gma-u.5   100817871   transmembrane E3 ubiquitin-protein ligase FLY2 
 gma-u.5   100802452   transmembrane E3 ubiquitin-protein ligase FLY2 
 sly-u.5   101267382   transmembrane E3 ubiquitin-protein ligase FLY1-like 
 sly-u.5   101247339   transmembrane E3 ubiquitin-protein ligase FLY2 
 vvi-u.5   100243855   transmembrane E3 ubiquitin-protein ligase FLY2 
 ppo-u.5   7469556   transmembrane E3 ubiquitin-protein ligase FLY2 
 ppo-u.5   18106775   transmembrane E3 ubiquitin-protein ligase FLY2 
 mtr-u.5   25492906   transmembrane E3 ubiquitin-protein ligase FLY2 

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Top 50 coexpressed genes to 123044732 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123044732 (tae-r.2 coexpression data)

CoexMap"123044732"


taeLOC123044732 | Entrez gene ID : 123044732    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 1 1 2 3 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (397 genes)  IEA  
GO CC
GO:0012505 [list] [network] endomembrane system  (3167 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
Protein XP_044323509.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 1,  chlo 1,  mito 1,  vacu 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044323509.1)
Subcellular
localization
TargetP
mito 7,  scret 7  (predict for XP_044323509.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123044732
osa-u.5
for
4343316
zma-u.5
for
103633202
ath-u.5
for
AT2G20650
ath-u.5
for
AT4G28370
gma-u.5
for
102667590
gma-u.5
for
100817871
gma-u.5
for
100802452
sly-u.5
for
101267382
sly-u.5
for
101247339
vvi-u.5
for
100243855
ppo-u.5
for
7469556
ppo-u.5
for
18106775
mtr-u.5
for
25492906


Ortholog ID: 5468
Species tae tae hvu bdi osa zma sbi ath ath gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC123188526 LOC123052591 LOC123425962 LOC100834287 LOC4343316 LOC103633202 LOC110432900 AT4G28370 AT2G20650 LOC100785460 LOC102667590 LOC101247339 LOC101267382 LOC103834763 LOC103828154 LOC100243855 LOC18106775 LOC7469556 LOC25492906 LOC107909279 LOC107886787 LOC106357544 LOC106361200 LOC102581881 LOC102603721 LOC102606828 LOC107794498 LOC107758944 CHLRE_08g381900v5
Function* transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase 1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 DSC E3 ubiquitin ligase complex subunit 1-like RING/U-box superfamily protein RING/U-box superfamily protein transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase 1-like DSC E3 ubiquitin ligase complex subunit 1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase FLY1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03250 Viral life cycle - HIV-1 2
tae03272 Virion - Hepatitis viruses 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
bra00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 3
ppo05100 Bacterial invasion of epithelial cells 3
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123188526 123052591 123425962 100834287 4343316 103633202 110432900 828953 816593 100785460 102667590 101247339 101267382 103834763 103828154 100243855 18106775 7469556 25492906 107909279 107886787 106357544 106361200 102581881 102603721 102606828 107794498 107758944 5719849
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