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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123045017   RNA-binding protein CP33, chloroplastic 
 osa-u.5   4342438   RNA-binding protein CP33, chloroplastic 
 ath-u.5   CP33   chloroplast RNA-binding protein 33 
 gma-u.5   100814852   33 kDa ribonucleoprotein, chloroplastic 
 gma-u.5   100799014   putative chloroplast RNA-binding protein 33 
 gma-u.5   100789843   33 kDa ribonucleoprotein, chloroplastic 
 sly-u.5   101261547   33 kDa ribonucleoprotein, chloroplastic 
 vvi-u.5   100255531   33 kDa ribonucleoprotein, chloroplastic 
 ppo-u.5   7497651   RNA-binding protein CP33, chloroplastic 
 ppo-u.5   7488081   33 kDa ribonucleoprotein, chloroplastic 
 mtr-u.5   25499498   33 kDa ribonucleoprotein, chloroplastic 
 mtr-u.5   11435081   RNA-binding protein CP33, chloroplastic 

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Top 50 coexpressed genes to 123045017 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123045017 (tae-r.2 coexpression data)

CoexMap"123045017"


taeLOC123045017 | Entrez gene ID : 123045017    
Species tae osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot zma bna ghi
Paralog 1 1 1 3 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (54 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (303 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
Protein XP_044323860.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044323860.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044323860.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123045017

.
osa-u.5
for
4342438

.
ath-u.5
for
CP33

.
gma-u.5
for
100814852

.
gma-u.5
for
100799014

.
gma-u.5
for
100789843

.
sly-u.5
for
101261547

.
vvi-u.5
for
100255531

.
ppo-u.5
for
7497651

.
ppo-u.5
for
7488081

.
mtr-u.5
for
25499498

.
mtr-u.5
for
11435081

.


Ortholog ID: 7616
Species ath gma gma sly osa bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CP33 LOC100814852 LOC100799014 LOC101261547 LOC4342438 LOC103860758 LOC103863467 LOC100255531 LOC7488081 LOC7497651 LOC11435081 LOC25499498 LOC123052842 LOC123045017 LOC123426232 LOC107899408 LOC107914412 LOC106445153 LOC106448527 LOC8086422 LOC102600250 LOC102629868 LOC100839550 LOC107768838 LOC107767634
Function* chloroplast RNA-binding protein 33 33 kDa ribonucleoprotein, chloroplastic putative chloroplast RNA-binding protein 33 33 kDa ribonucleoprotein, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic 33 kDa ribonucleoprotein, chloroplastic 33 kDa ribonucleoprotein, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic 33 kDa ribonucleoprotein, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic RNA-binding protein CP33, chloroplastic 33 kDa ribonucleoprotein, chloroplastic-like 33 kDa ribonucleoprotein, chloroplastic RNA-binding protein CP33, chloroplastic 33 kDa ribonucleoprotein, chloroplastic 33 kDa ribonucleoprotein, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath00860 Porphyrin metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03018 RNA degradation 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03018 RNA degradation 3
tae00061 Fatty acid biosynthesis 3
tae00780 Biotin metabolism 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824403 100814852 100799014 101261547 4342438 103860758 103863467 100255531 7488081 7497651 11435081 25499498 123052842 123045017 123426232 107899408 107914412 106445153 106448527 8086422 102600250 102629868 100839550 107768838 107767634
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