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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123045357   DNA cross-link repair protein SNM1 
 tae-r.2   123189110   DNA cross-link repair protein SNM1 
 hvu-r.1   123426598   DNA cross-link repair protein SNM1 
 bdi-r.1   100832523   DNA cross-link repair protein SNM1 
 osa-u.5   4335730   DNA cross-link repair protein SNM1 
 zma-u.5   100192920   uncharacterized LOC100192920 
 sbi-r.1   8072056   DNA cross-link repair protein SNM1 
 ath-u.5   SNM1   DNA repair metallo-beta-lactamase family protein 
 gma-u.5   100790844   DNA cross-link repair protein SNM1 
 bra-r.6   103875283   DNA cross-link repair protein SNM1 
 ppo-u.5   7466282   DNA cross-link repair protein SNM1 
 mtr-u.5   11439525   DNA cross-link repair protein SNM1 
 bna-r.1   106349321   DNA cross-link repair protein SNM1 
 bna-r.1   106409662   DNA cross-link repair protein SNM1 
 sot-r.1   102587753   DNA cross-link repair protein SNM1 
 cit-r.1   102610837   DNA cross-link repair protein SNM1 
 nta-r.1   107776827   DNA cross-link repair protein SNM1-like 
 nta-r.1   107814303   DNA cross-link repair protein SNM1 
 cre-r.1   CHLRE_12g513254v5   uncharacterized protein 

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Top 50 coexpressed genes to 123045357 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123045357 (tae-r.2 coexpression data)

CoexMap"123045357"


taeLOC123045357 | Entrez gene ID : 123045357    
Species tae hvu bdi osa zma sbi ath gma bra ppo mtr bna sot cit nta cre vvi sly ghi
Paralog 2 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (39 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (59 genes)  IEA  
GO CC
GO MF
GO:0035312 [list] [network] 5'-3' DNA exonuclease activity  (26 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (104 genes)  IEA  
Protein XP_044324321.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_044324321.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_044324321.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123045357
tae-r.2
for
123189110
hvu-r.1
for
123426598
bdi-r.1
for
100832523
osa-u.5
for
4335730
zma-u.5
for
100192920
sbi-r.1
for
8072056
ath-u.5
for
SNM1
gma-u.5
for
100790844
bra-r.6
for
103875283
ppo-u.5
for
7466282
mtr-u.5
for
11439525
bna-r.1
for
106349321
bna-r.1
for
106409662
sot-r.1
for
102587753
cit-r.1
for
102610837
nta-r.1
for
107776827
nta-r.1
for
107814303
cre-r.1
for
CHLRE_12g513254v5


Ortholog ID: 12201
Species tae tae hvu bdi osa zma sbi ath gma bra ppo mtr bna bna sot cit nta nta cre
Symbol LOC123045357 LOC123189110 LOC123426598 LOC100832523 LOC4335730 LOC100192920 LOC8072056 SNM1 LOC100790844 LOC103875283 LOC7466282 LOC11439525 LOC106349321 LOC106409662 LOC102587753 LOC102610837 LOC107776827 LOC107814303 CHLRE_12g513254v5
Function* DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized LOC100192920 DNA cross-link repair protein SNM1 DNA repair metallo-beta-lactamase family protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1-like DNA cross-link repair protein SNM1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 3
sot00240 Pyrimidine metabolism 3
sot00480 Glutathione metabolism 3
sot01232 Nucleotide metabolism 3
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123045357 123189110 123426598 100832523 4335730 100192920 8072056 822280 100790844 103875283 7466282 11439525 106349321 106409662 102587753 102610837 107776827 107814303 5728512
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