ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123045941	nucleolar protein dao-5
tae-r.2	123127794	uncharacterized LOC123127794
tae-r.2	123137451	neurofilament heavy polypeptide
hvu-r.1	123401818	neurofilament heavy polypeptide-like
hvu-r.1	123427162	ABC transporter F family member 4-like
bdi-r.1	100825062	uncharacterized LOC100825062
bdi-r.1	100823597	muscle M-line assembly protein unc-89
osa-u.5	9266945	sister chromatid cohesion protein PDS5 homolog C
osa-u.5	4336311	sister chromatid cohesion protein PDS5 homolog C
osa-u.5	4335488	sister chromatid cohesion protein PDS5 homolog D
zma-u.5	103646255	titin homolog
zma-u.5	103641817	enolase-phosphatase E1
zma-u.5	109939418	uncharacterized LOC109939418
sbi-r.1	8060213	enolase-phosphatase E1
sbi-r.1	8059675	microtubule-associated protein futsch
sbi-r.1	8066696	uncharacterized LOC8066696
ath-u.5	AT4G31880	transcriptional regulator
ath-u.5	AT5G10950	Tudor/PWWP/MBT superfamily protein
ath-u.5	AT1G15940	Tudor/PWWP/MBT superfamily protein
gma-u.5	100809147	nucleolar protein dao-5
gma-u.5	100818050	uncharacterized LOC100818050
gma-u.5	100812058	uncharacterized LOC100812058
sly-u.5	101268581	sister chromatid cohesion protein PDS5 homolog C
sly-u.5	104646574	sister chromatid cohesion protein PDS5 homolog E-like
bra-r.6	103842872	cinnamoyl-CoA reductase 1
bra-r.6	103836009	glutamic acid-rich protein
bra-r.6	103832454	glutamic acid-rich protein
vvi-u.5	100248351	sister chromatid cohesion protein PDS5 homolog C
vvi-u.5	100260975	sister chromatid cohesion protein PDS5 homolog C
ppo-u.5	7487059	sister chromatid cohesion protein PDS5 homolog D
ppo-u.5	7493222	sister chromatid cohesion protein PDS5 homolog D
ppo-u.5	7493403	uncharacterized LOC7493403
mtr-u.5	25491183	uncharacterized LOC25491183
mtr-u.5	11442229	triadin
mtr-u.5	11423336	muscle M-line assembly protein unc-89
ghi-r.1	107958994	midasin
ghi-r.1	107906837	triadin
ghi-r.1	107906838	triadin
bna-r.1	106354823	sister chromatid cohesion protein PDS5 homolog D
bna-r.1	106430116	sister chromatid cohesion protein PDS5 homolog D
bna-r.1	106430760	sister chromatid cohesion protein PDS5 homolog D-like
sot-r.1	102591624	uncharacterized LOC102591624
sot-r.1	102591295	uncharacterized LOC102591295
sot-r.1	102579340	sister chromatid cohesion protein PDS5 homolog A-like
cit-r.1	102614026	sister chromatid cohesion protein PDS5 homolog C-like
cit-r.1	102624143	sister chromatid cohesion protein PDS5 homolog C
nta-r.1	107772387	sister chromatid cohesion protein PDS5 homolog D-like
nta-r.1	107767311	sister chromatid cohesion protein PDS5 homolog D
nta-r.1	107772436	sister chromatid cohesion protein PDS5 homolog C-like
cre-r.1	CHLRE_02g099601v5	uncharacterized protein
cre-r.1	CHLRE_01g032550v5	uncharacterized protein

Top 50 coexpressed genes to 123045941 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123045941 (tae-r.2 coexpression data)

CoexMap"123045941"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007064 [list] [network] mitotic sister chromatid cohesion	(33 genes)	IEA
GO:0006281 [list] [network] DNA repair	(883 genes)	IEA

GO CC

GO:0000785 [list] [network] chromatin	(928 genes)	IEA
GO:0005634 [list] [network] nucleus	(8281 genes)	IEA

GO MF

Protein

XP_044325122.1 [sequence] [blastp]
XP_044325123.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_044325122.1)
nucl 10	(predict for XP_044325123.1)

Subcellular
localization
TargetP

mito 5, other 4	(predict for XP_044325122.1)
mito 5, other 4	(predict for XP_044325123.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123045941	tae-r.2 for 123127794	tae-r.2 for 123137451	hvu-r.1 for 123401818	hvu-r.1 for 123427162	bdi-r.1 for 100825062	bdi-r.1 for 100823597	osa-u.5 for 9266945	osa-u.5 for 4336311	osa-u.5 for 4335488	zma-u.5 for 103646255	zma-u.5 for 103641817	zma-u.5 for 109939418	sbi-r.1 for 8060213	sbi-r.1 for 8059675	sbi-r.1 for 8066696	ath-u.5 for AT4G31880	ath-u.5 for AT5G10950	ath-u.5 for AT1G15940	gma-u.5 for 100809147	gma-u.5 for 100818050	gma-u.5 for 100812058	sly-u.5 for 101268581	sly-u.5 for 104646574	bra-r.6 for 103842872	bra-r.6 for 103836009	bra-r.6 for 103832454	vvi-u.5 for 100248351	vvi-u.5 for 100260975	ppo-u.5 for 7487059	ppo-u.5 for 7493222	ppo-u.5 for 7493403	mtr-u.5 for 25491183	mtr-u.5 for 11442229	mtr-u.5 for 11423336	ghi-r.1 for 107958994	ghi-r.1 for 107906837	ghi-r.1 for 107906838	bna-r.1 for 106354823	bna-r.1 for 106430116	bna-r.1 for 106430760	sot-r.1 for 102591624	sot-r.1 for 102591295	sot-r.1 for 102579340	cit-r.1 for 102614026	cit-r.1 for 102624143	nta-r.1 for 107772387	nta-r.1 for 107767311	nta-r.1 for 107772436	cre-r.1 for CHLRE_02g099601v5	cre-r.1 for CHLRE_01g032550v5

Ortholog

Ortholog ID: 597

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

nucleolar protein dao-5

neurofilament heavy polypeptide

neurofilament heavy polypeptide-like

ABC transporter F family member 4-like

uncharacterized LOC100825062

muscle M-line assembly protein unc-89

sister chromatid cohesion protein PDS5 homolog C

sister chromatid cohesion protein PDS5 homolog D

titin homolog

uncharacterized LOC103653756

sister chromatid cohesion protein PDS5 homolog B-B-like

enolase-phosphatase E1

microtubule-associated protein futsch

MATH and LRR domain-containing protein PFE0570w

transcriptional regulator

Tudor/PWWP/MBT superfamily protein

uncharacterized LOC100812058

muscle M-line assembly protein unc-89

sister chromatid cohesion protein PDS5 homolog E

sister chromatid cohesion protein PDS5 homolog D-like

cinnamoyl-CoA reductase 1

DEAD-box ATP-dependent RNA helicase 28

neurofilament heavy polypeptide

sister chromatid cohesion protein PDS5 homolog C

sister chromatid cohesion protein PDS5 homolog D

uncharacterized LOC7493403

triadin

muscle M-line assembly protein unc-89

sister chromatid cohesion protein PDS5

triadin

WASH complex subunit 2

sister chromatid cohesion protein PDS5 homolog D-like

sister chromatid cohesion protein PDS5 homolog E-like

sister chromatid cohesion protein PDS5 homolog C-like

uncharacterized LOC102591624

uncharacterized LOC102591295

muscle M-line assembly protein unc-89

sister chromatid cohesion protein PDS5 homolog C-like

sister chromatid cohesion protein PDS5 homolog C

sister chromatid cohesion protein PDS5 homolog D

sister chromatid cohesion protein PDS5 homolog C-like

sister chromatid cohesion protein PDS5 homolog D

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03410	Base excision repair	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03013	Nucleocytoplasmic transport	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

123045941

123137451

123144807

123401818

123427162

100825062

100823597

9266945

4336311

4335488

103646255

103653756

103654690

8060213

8059675

8071467

829318

838164

844420

100812058

100790092

101246231

101253678

103842872

103855892

103862094

100248351

100260975

7487059

7493222

7493403

11442229

11423336

11437017

107906837

107906838

107953744

106430760

106346800

106420502

102591624

102591295

102605879

102614026

102624143

107767311

107772436

107830807

66052408

5715404

The preparation time of this page was 0.6 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	3	3	3	3	3	2	3	2	3	3	3	3	3	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123045941 (tae-r.2 coexpression data)

Top 50 enrichment test to 123045941 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**