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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123046965   protein RCC2 
 osa-u.5   4337298   uncharacterized LOC4337298 
 zma-u.5   100193728   uncharacterized LOC100193728 
 ath-u.5   AT1G19880   Regulator of chromosome condensation (RCC1) family protein 
 gma-u.5   100819842   protein RCC2 
 gma-u.5   100802977   protein RCC2 
 sly-u.5   101256481   uncharacterized LOC101256481 
 vvi-u.5   100245560   uncharacterized LOC100245560 
 ppo-u.5   7490668   uncharacterized LOC7490668 
 ppo-u.5   7477654   uncharacterized LOC7477654 
 mtr-u.5   25490253   protein RCC2 homolog 

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Top 50 coexpressed genes to 123046965 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123046965 (tae-r.2 coexpression data)

CoexMap"123046965"


taeLOC123046965 | Entrez gene ID : 123046965    
Species tae osa zma ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi nta bna
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034260 [list] [network] negative regulation of GTPase activity  (7 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
GO:0031267 [list] [network] small GTPase binding  (115 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044326359.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044326359.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_044326359.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123046965

.
osa-u.5
for
4337298

.
zma-u.5
for
100193728

.
ath-u.5
for
AT1G19880

.
gma-u.5
for
100819842

.
gma-u.5
for
100802977

.
sly-u.5
for
101256481

.
vvi-u.5
for
100245560

.
ppo-u.5
for
7490668

.
ppo-u.5
for
7477654

.
mtr-u.5
for
25490253

.


Ortholog ID: 8244
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT1G19880 LOC100819842 LOC100802977 LOC101256481 LOC4337298 LOC100193728 LOC103829472 LOC100245560 LOC7490668 LOC7477654 LOC25490253 LOC123046965 LOC123190637 LOC123413138 LOC123428018 LOC107957584 LOC121218143 LOC106411128 LOC106358269 CHLRE_17g742200v5 LOC8070278 LOC102588641 LOC102617176 LOC100828048 LOC107776184
Function* Regulator of chromosome condensation (RCC1) family protein protein RCC2 protein RCC2 uncharacterized LOC101256481 uncharacterized LOC4337298 uncharacterized LOC100193728 protein RCC2-like uncharacterized LOC100245560 uncharacterized LOC7490668 uncharacterized LOC7477654 protein RCC2 homolog protein RCC2 protein RCC2 protein RCC2-like protein RCC2 homolog protein RCC2 homolog protein RCC2 homolog protein RCC2 protein RCC2-like uncharacterized protein protein RCC2 protein RCC2 uncharacterized LOC102617176 protein RCC2 uncharacterized LOC107776184
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma03013 Nucleocytoplasmic transport 3
gma03008 Ribosome biogenesis in eukaryotes 3
gma00514 Other types of O-glycan biosynthesis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03008 Ribosome biogenesis in eukaryotes 3
gma03082 ATP-dependent chromatin remodeling 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03040 Spliceosome 4
vvi01232 Nucleotide metabolism 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00510 N-Glycan biosynthesis 2
cre00513 Various types of N-glycan biosynthesis 2
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838576 100819842 100802977 101256481 4337298 100193728 103829472 100245560 7490668 7477654 25490253 123046965 123190637 123413138 123428018 107957584 121218143 106411128 106358269 5726671 8070278 102588641 102617176 100828048 107776184
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