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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123053282   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 tae-r.2   123045455   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 tae-r.2   123189196   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 hvu-r.1   123426705   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 bdi-r.1   100821161   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 osa-u.5   4335833   uncharacterized LOC4335833 
 zma-u.5   100279307   uncharacterized LOC100279307 
 zma-u.5   103641635   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 sbi-r.1   8073022   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 ath-u.5   AT1G43690   ubiquitin interaction motif-containing protein 
 gma-u.5   100815405   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 gma-u.5   100813222   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 sly-u.5   101265818   uncharacterized LOC101265818 
 bra-r.6   103847704   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 vvi-u.5   100258904   uncharacterized LOC100258904 
 ppo-u.5   18096176   uncharacterized LOC18096176 
 ppo-u.5   7469216   uncharacterized LOC7469216 
 mtr-u.5   11417848   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 ghi-r.1   121229529   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 ghi-r.1   107957525   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 ghi-r.1   107914112   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 bna-r.1   106424785   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 bna-r.1   106410722   ubiquitin carboxyl-terminal hydrolase MINDY-3 
 sot-r.1   102589602   protein FAM188A 
 cit-r.1   102611276   uncharacterized LOC102611276 
 nta-r.1   107817612   uncharacterized LOC107817612 
 nta-r.1   107807365   uncharacterized LOC107807365 
 cre-r.1   CHLRE_06g286600v5   uncharacterized protein 

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Top 50 coexpressed genes to 123053282 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123053282 (tae-r.2 coexpression data)

CoexMap"123053282"


taeLOC123053282 | Entrez gene ID : 123053282    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 2 1 1 2 1 1 1 2 1 3 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071108 [list] [network] protein K48-linked deubiquitination  (75 genes)  IEA  
GO CC
GO MF
GO:1990380 [list] [network] K48-linked deubiquitinase activity  (14 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (249 genes)  IEA  
Protein XP_044332672.1 [sequence] [blastp]
XP_044332673.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_044332672.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_044332673.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044332672.1)
other 8  (predict for XP_044332673.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123053282
tae-r.2
for
123045455
tae-r.2
for
123189196
hvu-r.1
for
123426705
bdi-r.1
for
100821161
osa-u.5
for
4335833
zma-u.5
for
100279307
zma-u.5
for
103641635
sbi-r.1
for
8073022
ath-u.5
for
AT1G43690
gma-u.5
for
100815405
gma-u.5
for
100813222
sly-u.5
for
101265818
bra-r.6
for
103847704
vvi-u.5
for
100258904
ppo-u.5
for
18096176
ppo-u.5
for
7469216
mtr-u.5
for
11417848
ghi-r.1
for
121229529
ghi-r.1
for
107957525
ghi-r.1
for
107914112
bna-r.1
for
106424785
bna-r.1
for
106410722
sot-r.1
for
102589602
cit-r.1
for
102611276
nta-r.1
for
107817612
nta-r.1
for
107807365
cre-r.1
for
CHLRE_06g286600v5


Ortholog ID: 7832
Species tae tae tae hvu bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC123053282 LOC123045455 LOC123189196 LOC123426705 LOC100821161 LOC4335833 LOC100279307 LOC103641635 LOC8073022 AT1G43690 LOC100815405 LOC100813222 LOC101265818 LOC103847704 LOC100258904 LOC18096176 LOC7469216 LOC11417848 LOC107957525 LOC107914112 LOC107905237 LOC106424785 LOC106410722 LOC102589602 LOC102611276 LOC107817612 LOC107807365 CHLRE_06g286600v5
Function* ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 uncharacterized LOC4335833 uncharacterized LOC100279307 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin interaction motif-containing protein ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 uncharacterized LOC101265818 ubiquitin carboxyl-terminal hydrolase MINDY-3 uncharacterized LOC100258904 uncharacterized LOC18096176 uncharacterized LOC7469216 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 ubiquitin carboxyl-terminal hydrolase MINDY-3 protein FAM188A uncharacterized LOC102611276 uncharacterized LOC107817612 uncharacterized LOC107807365 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 3
zma04136 Autophagy - other 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03015 mRNA surveillance pathway 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03250 Viral life cycle - HIV-1 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03015 mRNA surveillance pathway 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00590 Arachidonic acid metabolism 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00650 Butanoate metabolism 2
ghi00590 Arachidonic acid metabolism 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00590 Arachidonic acid metabolism 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 6
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 6
bna04144 Endocytosis 3
bna03015 mRNA surveillance pathway 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123053282 123045455 123189196 123426705 100821161 4335833 100279307 103641635 8073022 840956 100815405 100813222 101265818 103847704 100258904 18096176 7469216 11417848 107957525 107914112 107905237 106424785 106410722 102589602 102611276 107817612 107807365 5721018
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