ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123059917	uncharacterized LOC123059917
tae-r.2	123076929	uncharacterized LOC123076929
tae-r.2	123068383	uncharacterized LOC123068383
hvu-r.1	123442554	uncharacterized LOC123442554
bdi-r.1	100840116	uncharacterized LOC100840116
osa-u.5	4325805	uncharacterized LOC4325805
zma-u.5	100191605	uncharacterized LOC100191605
sbi-r.1	110433492	uncharacterized LOC110433492
ath-u.5	AT1G25375	Metallo-hydrolase/oxidoreductase superfamily protein
gma-u.5	GLYII-12	glyoxalase GLYII-12
sly-u.5	101249639	uncharacterized LOC101249639
vvi-u.5	100247470	uncharacterized LOC100247470
ppo-u.5	7466887	uncharacterized LOC7466887
ppo-u.5	7466886	uncharacterized LOC7466886
mtr-u.5	11421877	uncharacterized LOC11421877
ghi-r.1	107909562	uncharacterized LOC107909562
ghi-r.1	107886651	uncharacterized LOC107886651
bna-r.1	BNAC05G20710D	uncharacterized BNAC05G20710D
bna-r.1	BNAA09G28480D	uncharacterized BNAA09G28480D
sot-r.1	102583044	uncharacterized LOC102583044
cit-r.1	102626745	hypothetical protein
nta-r.1	107765995	uncharacterized LOC107765995
nta-r.1	107766948	uncharacterized LOC107766948

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009536 [list] [network] plastid

(1935 genes)

IEA

GO MF

Protein

XP_044338405.1 [sequence] [blastp]
XP_044338406.1 [sequence] [blastp]
XP_044338407.1 [sequence] [blastp]
XP_044338408.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, E.R. 3, mito 1, E.R._plas 1, cyto 1, cyto_nucl 1	(predict for XP_044338405.1)
chlo 3, cyto 3, nucl 2, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044338406.1)
chlo 3, cyto 3, nucl 2, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044338407.1)
chlo 3, cyto 3, nucl 2, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044338408.1)

Subcellular
localization
TargetP

other 5	(predict for XP_044338405.1)
other 5	(predict for XP_044338406.1)
other 5	(predict for XP_044338407.1)
other 5	(predict for XP_044338408.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123059917	tae-r.2 for 123076929	tae-r.2 for 123068383	hvu-r.1 for 123442554	bdi-r.1 for 100840116	osa-u.5 for 4325805	zma-u.5 for 100191605	sbi-r.1 for 110433492	ath-u.5 for AT1G25375	gma-u.5 for GLYII-12	sly-u.5 for 101249639	vvi-u.5 for 100247470	ppo-u.5 for 7466887	ppo-u.5 for 7466886	mtr-u.5 for 11421877	ghi-r.1 for 107909562	ghi-r.1 for 107886651	bna-r.1 for BNAC05G20710D	bna-r.1 for BNAA09G28480D	sot-r.1 for 102583044	cit-r.1 for 102626745	nta-r.1 for 107765995	nta-r.1 for 107766948

Ortholog

Ortholog ID: 11055

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123059917

uncharacterized LOC123076929

uncharacterized LOC123068383

uncharacterized LOC123442554

uncharacterized LOC100840116

uncharacterized LOC4325805

uncharacterized LOC100191605

uncharacterized LOC110433492

Metallo-hydrolase/oxidoreductase superfamily protein

glyoxalase GLYII-12

uncharacterized LOC101249639

uncharacterized LOC100247470

uncharacterized LOC7466887

uncharacterized LOC7466886

uncharacterized LOC11421877

uncharacterized LOC107909562

uncharacterized LOC107886651

uncharacterized BNAC05G20710D

uncharacterized BNAA09G28480D

uncharacterized LOC102583044

hypothetical protein

uncharacterized LOC107765995

uncharacterized LOC107766948

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	5
tae00940	Phenylpropanoid biosynthesis	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	5
tae01250	Biosynthesis of nucleotide sugars	3
tae03060	Protein export	2
tae04141	Protein processing in endoplasmic reticulum	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4
zma01230	Biosynthesis of amino acids	4
zma01200	Carbon metabolism	2
zma04146	Peroxisome	2
zma00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00541	Biosynthesis of various nucleotide sugars	2
ath01250	Biosynthesis of nucleotide sugars	2
ath00561	Glycerolipid metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma03015	mRNA surveillance pathway	2
gma04136	Autophagy - other	2
gma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	7
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00410	beta-Alanine metabolism	2
vvi00640	Propanoate metabolism	2
vvi01200	Carbon metabolism	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01212	Fatty acid metabolism	3
ppo00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	9
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
ppo00071	Fatty acid degradation	3
ppo01200	Carbon metabolism	3
ppo00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00062	Fatty acid elongation	2
mtr01040	Biosynthesis of unsaturated fatty acids	2
mtr01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5
bna04145	Phagosome	5
bna00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5
bna04145	Phagosome	5
bna00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	3
cit00513	Various types of N-glycan biosynthesis	3
cit04141	Protein processing in endoplasmic reticulum	3
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	7
nta04141	Protein processing in endoplasmic reticulum	2
nta00270	Cysteine and methionine metabolism	2
nta00480	Glutathione metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	4
nta00190	Oxidative phosphorylation	3
nta00270	Cysteine and methionine metabolism	2
nta00480	Glutathione metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

123059917

123076929

123068383

123442554

100840116

4325805

100191605

110433492

839123

100778510

101249639

100247470

7466887

7466886

11421877

107909562

107886651

106397238

106347172

102583044

102626745

107765995

107766948

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123059917 (tae-r.2 coexpression data)

Top 50 enrichment test to 123059917 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	bra
Paralog	3	1	1	1	1	1	1	1	1	1	2	1	2	2	1	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123059917 (tae-r.2 coexpression data)

Top 50 enrichment test to 123059917 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**