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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123060341   DEAD-box ATP-dependent RNA helicase 20 
 tae-r.2   123077397   DEAD-box ATP-dependent RNA helicase 20 
 tae-r.2   123080220   DEAD-box ATP-dependent RNA helicase 30 
 tae-r.2   123071901   DEAD-box ATP-dependent RNA helicase 30 
 hvu-r.1   123442875   DEAD-box ATP-dependent RNA helicase 20 
 hvu-r.1   123445166   DEAD-box ATP-dependent RNA helicase 30 
 bdi-r.1   100832027   DEAD-box ATP-dependent RNA helicase 30 
 bdi-r.1   100824274   DEAD-box ATP-dependent RNA helicase 20 
 osa-u.5   9271802   DEAD-box ATP-dependent RNA helicase 30-like 
 osa-u.5   9268869   DEAD-box ATP-dependent RNA helicase 20-like 
 zma-u.5   542146   DEAD box RNA helicase 1 
 zma-u.5   100274281   uncharacterized LOC100274281 
 sbi-r.1   8056154   DEAD-box ATP-dependent RNA helicase 30 
 sbi-r.1   8084338   DEAD-box ATP-dependent RNA helicase 20 
 ath-u.5   AT5G63120   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   RH20   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100817092   DEAD-box ATP-dependent RNA helicase 30 
 gma-u.5   100781619   DEAD-box ATP-dependent RNA helicase 20 
 gma-u.5   100777610   DEAD-box ATP-dependent RNA helicase 30 
 sly-u.5   101265421   DEAD-box ATP-dependent RNA helicase 20 
 sly-u.5   ER68   ethylene-responsive RNA helicase 
 bra-r.6   103837456   DEAD-box ATP-dependent RNA helicase 30 
 bra-r.6   103832610   DEAD-box ATP-dependent RNA helicase 20 
 vvi-u.5   100248020   DEAD-box ATP-dependent RNA helicase 20 
 vvi-u.5   100260348   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7453797   DEAD-box ATP-dependent RNA helicase 20 
 ppo-u.5   7458051   DEAD-box ATP-dependent RNA helicase 30 
 ppo-u.5   18096745   DEAD-box ATP-dependent RNA helicase 20 
 mtr-u.5   11429899   DEAD-box ATP-dependent RNA helicase 20 
 mtr-u.5   25493727   DEAD-box ATP-dependent RNA helicase 20 
 ghi-r.1   107897390   DEAD-box ATP-dependent RNA helicase 20 
 ghi-r.1   107943288   DEAD-box ATP-dependent RNA helicase 20 
 ghi-r.1   107924201   DEAD-box ATP-dependent RNA helicase 20 
 bna-r.1   106366183   DEAD-box ATP-dependent RNA helicase 30 
 bna-r.1   106443553   DEAD-box ATP-dependent RNA helicase 20 
 bna-r.1   106415586   DEAD-box ATP-dependent RNA helicase 20 
 sot-r.1   102578396   DEAD-box ATP-dependent RNA helicase 20 
 sot-r.1   102594982   DEAD-box ATP-dependent RNA helicase 20 
 cit-r.1   102609234   DEAD-box ATP-dependent RNA helicase 20 
 cit-r.1   102619005   DEAD-box ATP-dependent RNA helicase 20 
 nta-r.1   107818648   DEAD-box ATP-dependent RNA helicase 20 
 nta-r.1   107812893   DEAD-box ATP-dependent RNA helicase 20 
 nta-r.1   107807691   DEAD-box ATP-dependent RNA helicase 20 
 cre-r.1   CHLRE_01g028200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123060341 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123060341 (tae-r.2 coexpression data)

CoexMap"123060341"


taeLOC123060341 | Entrez gene ID : 123060341    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 2 2 2 2 3 2 2 2 3 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (186 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044338956.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_044338956.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_044338956.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123060341
tae-r.2
for
123077397
tae-r.2
for
123080220
tae-r.2
for
123071901
hvu-r.1
for
123442875
hvu-r.1
for
123445166
bdi-r.1
for
100832027
bdi-r.1
for
100824274
osa-u.5
for
9271802
osa-u.5
for
9268869
zma-u.5
for
542146
zma-u.5
for
100274281
sbi-r.1
for
8056154
sbi-r.1
for
8084338
ath-u.5
for
AT5G63120
ath-u.5
for
RH20
gma-u.5
for
100817092
gma-u.5
for
100781619
gma-u.5
for
100777610
sly-u.5
for
101265421
sly-u.5
for
ER68
bra-r.6
for
103837456
bra-r.6
for
103832610
vvi-u.5
for
100248020
vvi-u.5
for
100260348
ppo-u.5
for
7453797
ppo-u.5
for
7458051
ppo-u.5
for
18096745
mtr-u.5
for
11429899
mtr-u.5
for
25493727
ghi-r.1
for
107897390
ghi-r.1
for
107943288
ghi-r.1
for
107924201
bna-r.1
for
106366183
bna-r.1
for
106443553
bna-r.1
for
106415586
sot-r.1
for
102578396
sot-r.1
for
102594982
cit-r.1
for
102609234
cit-r.1
for
102619005
nta-r.1
for
107818648
nta-r.1
for
107812893
nta-r.1
for
107807691
cre-r.1
for
CHLRE_01g028200v5


Ortholog ID: 3273
Species tae tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath gma gma gma sly sly bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC123060341 LOC123077397 LOC123080220 LOC123442875 LOC123445166 LOC100832027 LOC100824274 LOC9271802 LOC9268869 LOC542146 LOC100274281 LOC8056154 LOC8084338 AT5G63120 RH20 LOC100781619 LOC100777610 LOC100790464 LOC101265421 ER68 LOC103837456 LOC103832610 LOC100248020 LOC100260348 LOC7453797 LOC7458051 LOC18096745 LOC11429899 LOC25493727 LOC107897390 LOC107916365 LOC107906108 LOC106366183 LOC106443553 LOC106415586 LOC102578396 LOC102594982 LOC102609234 LOC102619005 LOC107818648 LOC107812893 LOC107790616 CHLRE_01g028200v5
Function* DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30-like DEAD-box ATP-dependent RNA helicase 20-like DEAD box RNA helicase 1 uncharacterized LOC100274281 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 P-loop containing nucleoside triphosphate hydrolases superfamily protein DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 ethylene-responsive RNA helicase DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 30 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20 DEAD-box ATP-dependent RNA helicase 20-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03040 Spliceosome 4
tae00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi00860 Porphyrin metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03022 Basal transcription factors 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00440 Phosphonate and phosphinate metabolism 6
bna00564 Glycerophospholipid metabolism 6
bna03083 Polycomb repressive complex 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 11
bna03008 Ribosome biogenesis in eukaryotes 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 9
bna03008 Ribosome biogenesis in eukaryotes 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot00970 Aminoacyl-tRNA biosynthesis 2
sot00220 Arginine biosynthesis 2
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03410 Base excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123060341 123077397 123080220 123442875 123445166 100832027 100824274 9271802 9268869 542146 100274281 8056154 8084338 836432 841958 100781619 100777610 100790464 101265421 544216 103837456 103832610 100248020 100260348 7453797 7458051 18096745 11429899 25493727 107897390 107916365 107906108 106366183 106443553 106415586 102578396 102594982 102609234 102619005 107818648 107812893 107790616 5715321
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