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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123060364   protein ALWAYS EARLY 2 
 tae-r.2   123068892   protein ALWAYS EARLY 3 
 tae-r.2   123077418   protein ALWAYS EARLY 3 
 hvu-r.1   123442893   protein ALWAYS EARLY 3-like 
 bdi-r.1   100834481   protein ALWAYS EARLY 3 
 osa-u.5   4327312   protein ALWAYS EARLY 3 
 zma-u.5   100217142   uncharacterized LOC100217142 
 zma-u.5   103634898   protein ALWAYS EARLY 2 
 sbi-r.1   8082840   protein ALWAYS EARLY 3 

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Top 50 coexpressed genes to 123060364 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123060364 (tae-r.2 coexpression data)

CoexMap"123060364"


taeLOC123060364 | Entrez gene ID : 123060364    
Species tae hvu bdi osa zma sbi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot
Paralog 3 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051726 [list] [network] regulation of cell cycle  (371 genes)  IEA  
GO:0022414 [list] [network] reproductive process  (604 genes)  IEA  
GO:0006351 [list] [network] DNA-templated transcription  (790 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1094 genes)  IEA  
GO CC
GO:0017053 [list] [network] transcription repressor complex  (9 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (578 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044338990.1 [sequence] [blastp]
XP_044338991.1 [sequence] [blastp]
XP_044338992.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_044338990.1)
nucl 6,  chlo 1,  cysk 1,  plas 1,  golg_plas 1  (predict for XP_044338991.1)
nucl 6,  chlo 1,  cysk 1,  plas 1,  golg_plas 1  (predict for XP_044338992.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_044338990.1)
other 6  (predict for XP_044338991.1)
other 6  (predict for XP_044338992.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123060364
tae-r.2
for
123068892
tae-r.2
for
123077418
hvu-r.1
for
123442893
bdi-r.1
for
100834481
osa-u.5
for
4327312
zma-u.5
for
100217142
zma-u.5
for
103634898
sbi-r.1
for
8082840


Ortholog ID: 16103
Species tae tae tae hvu bdi osa zma zma sbi
Symbol LOC123060364 LOC123068892 LOC123077418 LOC123442893 LOC100834481 LOC4327312 LOC100217142 LOC103634898 LOC8082840
Function* protein ALWAYS EARLY 2 protein ALWAYS EARLY 3 protein ALWAYS EARLY 3 protein ALWAYS EARLY 3-like protein ALWAYS EARLY 3 protein ALWAYS EARLY 3 uncharacterized LOC100217142 protein ALWAYS EARLY 2 protein ALWAYS EARLY 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123060364 123068892 123077418 123442893 100834481 4327312 100217142 103634898 8082840
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