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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123060546   phospholipase D alpha 1 
 osa-u.5   4337942   phospholipase D alpha 1-like 
 osa-u.5   4327647   phospholipase D alpha 1-like 
 osa-u.5   4341469   phospholipase D alpha 2-like 
 zma-u.5   542702   phospholipase D 
 zma-u.5   100280155   phospholipase D family protein 
 zma-u.5   100279815   phospholipase D family protein 
 ath-u.5   PLDALPHA1   phospholipase D alpha 1 
 ath-u.5   PLDALPHA2   phospholipase D alpha 2 
 gma-u.5   100791688   phospholipase D alpha 1 
 gma-u.5   100784434   phospholipase D alpha 1 
 gma-u.5   100786410   phospholipase D alpha 1 
 sly-u.5   TPLD   phospholipase D alpha 
 sly-u.5   101264185   phospholipase D alpha 1-like 
 sly-u.5   PLDa2   phospholipase PLDa2 
 vvi-u.5   100257647   phospholipase D alpha 1 
 vvi-u.5   PLD   phospholipase D alpha 
 ppo-u.5   7475119   phospholipase D alpha 1 
 ppo-u.5   18096711   phospholipase D alpha 1 
 mtr-u.5   11420371   phospholipase D alpha 1 
 mtr-u.5   11436615   phospholipase D alpha 1 
 mtr-u.5   11435279   phospholipase D alpha 1 

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Top 50 coexpressed genes to 123060546 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123060546 (tae-r.2 coexpression data)

CoexMap"123060546"


taeLOC123060546 | Entrez gene ID : 123060546    
Species tae osa zma ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi nta bna
Paralog 1 3 3 2 3 3 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00564 [list] [network] Glycerophospholipid metabolism (337 genes)
taes00565 [list] [network] Ether lipid metabolism (86 genes)
taes04144 [list] [network] Endocytosis (447 genes)
GO BP
GO:0046470 [list] [network] phosphatidylcholine metabolic process  (69 genes)  IEA  
GO:0009395 [list] [network] phospholipid catabolic process  (74 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2781 genes)  IEA  
GO MF
GO:0004630 [list] [network] phospholipase D activity  (50 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (1095 genes)  IEA  
Protein XP_044339240.1 [sequence] [blastp]
XP_044339241.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  mito 1,  cysk_plas 1  (predict for XP_044339240.1)
chlo 6,  cyto 3,  mito 1,  cysk_plas 1  (predict for XP_044339241.1)
Subcellular
localization
TargetP
scret 3,  other 3  (predict for XP_044339240.1)
scret 3,  other 3  (predict for XP_044339241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123060546

.
osa-u.5
for
4337942

.
osa-u.5
for
4327647

.
osa-u.5
for
4341469

.
zma-u.5
for
542702

.
zma-u.5
for
100280155

.
zma-u.5
for
100279815

.
ath-u.5
for
PLDALPHA1

.
ath-u.5
for
PLDALPHA2

.
gma-u.5
for
100791688

.
gma-u.5
for
100784434

.
gma-u.5
for
100786410

.
sly-u.5
for
TPLD

.
sly-u.5
for
101264185

.
sly-u.5
for
PLDa2

.
vvi-u.5
for
100257647

.
vvi-u.5
for
PLD

.
ppo-u.5
for
7475119

.
ppo-u.5
for
18096711

.
mtr-u.5
for
11420371

.
mtr-u.5
for
11436615

.
mtr-u.5
for
11435279

.


Ortholog ID: 1270
Species ath ath gma gma sly sly osa osa zma zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit cit bdi bdi nta nta
Symbol PLDALPHA1 PLDALPHA2 LOC100794115 LOC100784434 TPLD LOC101264185 LOC4337942 LOC4341469 LOC103630082 LOC100279815 LOC103840526 PLD LOC18096711 LOC11435279 LOC11436615 LOC123163188 LOC123060546 LOC123397410 LOC123443052 LOC107944262 LOC107937367 LOC125609497 LOC106387492 LOC8065077 LOC102588687 LOC102589221 LOC102578017 LOC102621799 LOC100839982 LOC100822640 LOC107772442 LOC107788090
Function* phospholipase D alpha 1 phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha phospholipase D alpha 1-like phospholipase D alpha 1-like phospholipase D alpha 2-like phospholipase D alpha 1 phospholipase D family protein phospholipase D alpha 2 phospholipase D alpha phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1-like phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha 2-like phospholipase D alpha 2 phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1-like phospholipase D alpha phospholipase D alpha 1-like phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1-like phospholipase D alpha 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma00565 Ether lipid metabolism 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 3
osa00565 Ether lipid metabolism 3
osa04144 Endocytosis 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 4
zma04517 IgSF CAM signaling 4
zma04814 Motor proteins 4
zma00564 Glycerophospholipid metabolism 2
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 2
bra04144 Endocytosis 2
bra00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 5
mtr00565 Ether lipid metabolism 5
mtr04144 Endocytosis 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 4
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 5
bna00565 Ether lipid metabolism 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 5
bna00565 Ether lipid metabolism 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04144 Endocytosis 6
sbi03040 Spliceosome 5
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 6
nta00565 Ether lipid metabolism 4
nta04144 Endocytosis 4
nta00561 Glycerolipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820816 841689 100794115 100784434 101257989 101264185 4337942 4341469 103630082 100279815 103840526 100232987 18096711 11435279 11436615 123163188 123060546 123397410 123443052 107944262 107937367 125609497 106387492 8065077 102588687 102589221 102578017 102621799 100839982 100822640 107772442 107788090
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