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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4339637   cold-regulated 413 inner membrane protein 1, chloroplastic 
 zma-u.5   542100   cold acclimation protein COR413-TM1 
 ath-u.5   COR314-TM2   cold regulated 314 thylakoid membrane 2 
 ath-u.5   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 gma-u.5   100306024   uncharacterized LOC100306024 
 sly-u.5   COR413IM1   cold-regulated 413 inner membrane protein 1, chloroplastic 
 vvi-u.5   100265908   cold-regulated 413 inner membrane protein 1, chloroplastic 
 ppo-u.5   18095285   cold-regulated 413 inner membrane protein 1, chloroplastic 
 mtr-u.5   11408207   cold-regulated 413 inner membrane protein 1, chloroplastic 

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Top 50 coexpressed genes to 4339637 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4339637 (osa-u.5 coexpression data)

CoexMap"123061669"


taeLOC123061669 | Entrez gene ID : 123061669    
Species osa zma ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
Protein XP_044340792.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  vacu 1,  pero 1  (predict for XP_044340792.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_044340792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4339637

.
zma-u.5
for
542100

.
ath-u.5
for
COR314-TM2

.
ath-u.5
for
COR413IM1

.
gma-u.5
for
100306024

.
sly-u.5
for
COR413IM1

.
vvi-u.5
for
100265908

.
ppo-u.5
for
18095285

.
mtr-u.5
for
11408207

.


Ortholog ID: 8721
Species ath ath gma sly osa zma bra vvi ppo mtr tae hvu hvu ghi ghi bna bna sbi sot cit nta nta
Symbol COR314-TM2 COR413IM1 LOC100306024 COR413IM1 LOC4339637 LOC542100 LOC103840487 LOC100265908 LOC18095285 LOC11408207 LOC123089942 LOC123450657 LOC123450678 LOC107891737 LOC107946120 LOC106367399 LOC106401222 LOC8074607 LOC102590681 LOC102606811 LOC107770293 LOC107805169
Function* cold regulated 314 thylakoid membrane 2 COLD REGULATED 314 INNER MEMBRANE 1 uncharacterized LOC100306024 cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold acclimation protein COR413-TM1 cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic uncharacterized LOC123089942 cold-regulated 413 inner membrane protein 2, chloroplastic-like cold-regulated 413 inner membrane protein 1, chloroplastic-like cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic-like cold-regulated 413 inner membrane protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 9
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03083 Polycomb repressive complex 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00520 Amino sugar and nucleotide sugar metabolism 5
ghi01250 Biosynthesis of nucleotide sugars 5
ghi00240 Pyrimidine metabolism 3
ghi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 3
sbi00500 Starch and sucrose metabolism 3
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 9
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 4
cit00061 Fatty acid biosynthesis 3
cit01040 Biosynthesis of unsaturated fatty acids 3
cit01212 Fatty acid metabolism 3
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839814 839815 100306024 101262681 4339637 542100 103840487 100265908 18095285 11408207 123089942 123450657 123450678 107891737 107946120 106367399 106401222 8074607 102590681 102606811 107770293 107805169
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