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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100825406  putative pentatricopeptide repeat-containing protein At5g40405 
 osa-u.5  4325578  putative pentatricopeptide repeat-containing protein At5g40405 
 zma-u.5  100192486  Putative pentatricopeptide repeat-containing protein 
 ath-u.5  AT5G40405  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100795404  putative pentatricopeptide repeat-containing protein At5g40405 
 bra-r.6  103864689  putative pentatricopeptide repeat-containing protein At5g40405 
 vvi-u.5  100853141  putative pentatricopeptide repeat-containing protein At5g40405 
 vvi-u.5  104878192  putative pentatricopeptide repeat-containing protein At5g40405 
 bna-r.1  106397200  putative pentatricopeptide repeat-containing protein At5g40405 
 bna-r.1  106446810  putative pentatricopeptide repeat-containing protein At5g40405 
 cit-r.1  102615923  putative pentatricopeptide repeat-containing protein At5g40405 

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Top 50 coexpressed genes to 100825406 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825406 (bdi-r.1 coexpression data)

CoexMap"123061688"


taeLOC123061688 | Entrez gene ID : 123061688
Species bdi osa zma ath gma bra vvi bna cit nta sot ppo tae sly mtr hvu sbi cre ghi
Paralog 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044340821.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044340821.1)
Subcellular
localization
TargetP
chlo 4,  mito 4  (predict for XP_044340821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100825406


osa-u.5
for
4325578


zma-u.5
for
100192486


ath-u.5
for
AT5G40405


gma-u.5
for
100795404


bra-r.6
for
103864689


vvi-u.5
for
100853141


vvi-u.5
for
104878192


bna-r.1
for
106397200


bna-r.1
for
106446810


cit-r.1
for
102615923



Ortholog ID: 13236
Species bdi osa zma ath gma bra vvi vvi bna bna cit
Symbol LOC100825406 LOC4325578 LOC100192486 AT5G40405 LOC100795404 LOC103864689 LOC100853141 LOC104878192 LOC106397200 LOC106446810 LOC102615923
Function* putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 Putative pentatricopeptide repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825406 4325578 100192486 3771385 100795404 103864689 100853141 104878192 106397200 106446810 102615923
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