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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123062326   probable E3 ubiquitin-protein ligase RHC1A 
 tae-r.2   123071090   probable E3 ubiquitin-protein ligase RHC1A 
 tae-r.2   123079458   probable E3 ubiquitin-protein ligase RHC1A 
 hvu-r.1   123444626   probable E3 ubiquitin-protein ligase RHC1A 
 bdi-r.1   100840196   probable E3 ubiquitin-protein ligase RHC1A 
 osa-u.5   4327967   probable E3 ubiquitin-protein ligase RHC1A 
 zma-u.5   100194242   uncharacterized LOC100194242 
 zma-u.5   100282497   uncharacterized LOC100282497 
 sbi-r.1   110433405   probable E3 ubiquitin-protein ligase RHC1A 

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Top 50 coexpressed genes to 123062326 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123062326 (tae-r.2 coexpression data)

CoexMap"123062326"


taeLOC123062326 | Entrez gene ID : 123062326    
Species tae hvu bdi osa zma sbi gma bra sot cre ghi ppo sly cit ath nta mtr bna vvi
Paralog 3 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1642 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
Protein XP_044341721.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_044341721.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044341721.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123062326
tae-r.2
for
123071090
tae-r.2
for
123079458
hvu-r.1
for
123444626
bdi-r.1
for
100840196
osa-u.5
for
4327967
zma-u.5
for
100194242
zma-u.5
for
100282497
sbi-r.1
for
110433405


Ortholog ID: 16204
Species tae tae tae hvu bdi osa zma zma sbi
Symbol LOC123062326 LOC123071090 LOC123079458 LOC123444626 LOC100840196 LOC4327967 LOC100194242 LOC100282497 LOC110433405
Function* probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A uncharacterized LOC100194242 uncharacterized LOC100282497 probable E3 ubiquitin-protein ligase RHC1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 2
tae00780 Biotin metabolism 2
tae01212 Fatty acid metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 4
osa04145 Phagosome 3
osa04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04120 Ubiquitin mediated proteolysis 2
zma00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123062326 123071090 123079458 123444626 100840196 4327967 100194242 100282497 110433405
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