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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4325465   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 zma-u.5   103634821   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ath-u.5   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806792   thylakoid lumenal 15 kDa protein 1, chloroplastic-like 
 gma-u.5   100500352   pentapeptide repeat-containing protein 
 sly-u.5   101267125   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 vvi-u.5   100244370   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ppo-u.5   7490377   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ppo-u.5   7487975   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 mtr-u.5   25489345   thylakoid lumenal 15 kDa protein 1, chloroplastic 

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Top 50 coexpressed genes to 4325465 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4325465 (osa-u.5 coexpression data)

CoexMap"123065883"


taeLOC123065883 | Entrez gene ID : 123065883    
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (375 genes)  IEA  
GO MF
Protein XP_044345018.1 [sequence] [blastp]
XP_044345019.1 [sequence] [blastp]
XP_044345021.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  mito 1,  vacu 1  (predict for XP_044345018.1)
chlo 5,  extr 3,  nucl_plas 1,  nucl 1  (predict for XP_044345019.1)
chlo 4,  extr 2,  vacu 2,  nucl 1,  mito 1  (predict for XP_044345021.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_044345018.1)
mito 7,  other 6  (predict for XP_044345019.1)
other 3,  chlo 3  (predict for XP_044345021.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4325465
zma-u.5
for
103634821
ath-u.5
for
AT2G44920
gma-u.5
for
100806792
gma-u.5
for
100500352
sly-u.5
for
101267125
vvi-u.5
for
100244370
ppo-u.5
for
7490377
ppo-u.5
for
7487975
mtr-u.5
for
25489345


Ortholog ID: 8916
Species tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta cre
Symbol LOC123060059 LOC123442639 LOC100832450 LOC4325465 LOC103634821 LOC8073314 AT2G44920 LOC100500352 LOC100806792 LOC101267125 LOC103866844 LOC100244370 LOC7490377 LOC7487975 LOC25489345 LOC107930054 LOC121207799 LOC106390286 LOC106450770 LOC102604196 LOC102629323 LOC107765234 CHLRE_16g687300v5
Function* thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentapeptide repeat-containing protein thylakoid lumenal 15 kDa protein 1, chloroplastic-like thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123060059 123442639 100832450 4325465 103634821 8073314 819101 100500352 100806792 101267125 103866844 100244370 7490377 7487975 25489345 107930054 121207799 106390286 106450770 102604196 102629323 107765234 5717662
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