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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123072822   transcription factor PCL1 
 osa-u.5   4338783   transcription factor MYBC1 
 osa-u.5   4327512   transcription factor PCL1-like 
 osa-u.5   4326391   transcription factor PCL1-like 
 zma-u.5   107548110   Putative MYB DNA-binding domain superfamily protein 
 zma-u.5   103651023   transcription factor PCL1 
 zma-u.5   107305672   Homeodomain-like superfamily protein 
 ath-u.5   MYBC1   Homeodomain-like superfamily protein 
 ath-u.5   AT3G10760   Homeodomain-like superfamily protein 
 ath-u.5   PCL1   Homeodomain-like superfamily protein 
 gma-u.5   LUXC   transcription factor LUXc 
 gma-u.5   LUXB   transcription factor LUXb 
 gma-u.5   100815363   transcription factor MYBC1 
 sly-u.5   101249222   transcription factor MYBC1-like 
 sly-u.5   101265183   transcription factor MYBC1 
 vvi-u.5   100256764   transcription factor MYBC1 
 vvi-u.5   100253567   transcription factor PCL1 
 ppo-u.5   7468625   transcription factor BOA 
 ppo-u.5   7495685   transcription factor MYBC1 
 ppo-u.5   18106100   transcription factor MYBC1 
 mtr-u.5   11415024   transcription factor MYBC1 
 mtr-u.5   11427644   transcription factor PCL1 

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Top 50 coexpressed genes to 123072822 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123072822 (tae-r.2 coexpression data)

CoexMap"123072822"


taeLOC123072822 | Entrez gene ID : 123072822    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 3 3 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044352423.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044352423.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044352423.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123072822
osa-u.5
for
4338783
osa-u.5
for
4327512
osa-u.5
for
4326391
zma-u.5
for
107548110
zma-u.5
for
103651023
zma-u.5
for
107305672
ath-u.5
for
MYBC1
ath-u.5
for
AT3G10760
ath-u.5
for
PCL1
gma-u.5
for
LUXC
gma-u.5
for
LUXB
gma-u.5
for
100815363
sly-u.5
for
101249222
sly-u.5
for
101265183
vvi-u.5
for
100256764
vvi-u.5
for
100253567
ppo-u.5
for
7468625
ppo-u.5
for
7495685
ppo-u.5
for
18106100
mtr-u.5
for
11415024
mtr-u.5
for
11427644


Ortholog ID: 1039
Species tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath gma gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta cre
Symbol LOC123055624 LOC123080986 LOC123441160 LOC123442999 LOC100835635 LOC100834697 LOC4327512 LOC4338783 LOC100280967 LOC107305672 LOC110433282 LOC8085135 MYBC1 PCL1 LOC100815363 LOC100797237 LOC101265183 LOC103873296 LOC103866525 LOC100253567 LOC100256764 LOC7495685 LOC7468625 LOC11427644 LOC11415024 LOC107906573 LOC107922230 LOC106434567 LOC106376459 LOC102600588 LOC102580374 LOC102629958 LOC102629795 LOC107763213 LOC107774049 CHLRE_09g410450v5
Function* transcription factor MYBC1 transcription factor PCL1 transcription factor PCL1-like transcription factor MYBC1-like transcription factor MYBC1 transcription factor PCL1 transcription factor PCL1-like transcription factor MYBC1 ARR1 protein-like Homeodomain-like superfamily protein transcription factor PCL1-like transcription factor MYBC1 Homeodomain-like superfamily protein Homeodomain-like superfamily protein transcription factor MYBC1 transcription factor MYBC1 transcription factor MYBC1 transcription factor LUX-like transcription factor MYBC1 transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1 transcription factor BOA transcription factor PCL1 transcription factor MYBC1 transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1 transcription factor LUX-like transcription factor PCL1-like transcription factor PCL1-like transcription factor MYBC1-like transcription factor LUX transcription factor PCL1-like transcription factor PCL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123055624 123080986 123441160 123442999 100835635 100834697 4327512 4338783 100280967 107305672 110433282 8085135 818697 823817 100815363 100797237 101265183 103873296 103866525 100253567 100256764 7495685 7468625 11427644 11415024 107906573 107922230 106434567 106376459 102600588 102580374 102629958 102629795 107763213 107774049 5722278
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