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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123072849   AP3-complex subunit beta-A 
 osa-u.5   4326400   AP3-complex subunit beta-A 
 zma-u.5   100383432   AP3-complex subunit beta-A 
 ath-u.5   PAT2   protein affected trafficking 2 
 gma-u.5   100806345   AP3-complex subunit beta-A 
 gma-u.5   100802718   AP3-complex subunit beta-A 
 sly-u.5   101259755   AP3-complex subunit beta-A 
 vvi-u.5   100251289   AP3-complex subunit beta-A 
 ppo-u.5   7458139   AP3-complex subunit beta-A 
 mtr-u.5   11433764   AP3-complex subunit beta-A 

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Top 50 coexpressed genes to 123072849 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123072849 (tae-r.2 coexpression data)

CoexMap"123072849"


taeLOC123072849 | Entrez gene ID : 123072849    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes04142 [list] [network] Lysosome (228 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (789 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (1129 genes)  IEA  
GO CC
GO:0030123 [list] [network] AP-3 adaptor complex  (6 genes)  IEA  
GO:0030117 [list] [network] membrane coat  (220 genes)  IEA  
GO MF
Protein XP_044352448.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  plas 1,  extr 1  (predict for XP_044352448.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_044352448.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123072849

.
osa-u.5
for
4326400

.
zma-u.5
for
100383432

.
ath-u.5
for
PAT2

.
gma-u.5
for
100806345

.
gma-u.5
for
100802718

.
sly-u.5
for
101259755

.
vvi-u.5
for
100251289

.
ppo-u.5
for
7458139

.
mtr-u.5
for
11433764

.


Ortholog ID: 10824
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PAT2 LOC100802718 LOC100806345 LOC101259755 LOC4326400 LOC100383432 LOC103841454 LOC100251289 LOC7458139 LOC11433764 LOC123081006 LOC123072849 LOC123445704 LOC107904127 LOC107897306 LOC106415706 LOC106396408 LOC8068578 LOC102601904 LOC102624526 LOC100831932 LOC107803266 LOC107831473
Function* protein affected trafficking 2 AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A-like AP3-complex subunit beta-A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
ath04120 Ubiquitin mediated proteolysis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma00562 Inositol phosphate metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 3
gma04070 Phosphatidylinositol signaling system 2
gma04142 Lysosome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04142 Lysosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 5
bra04141 Protein processing in endoplasmic reticulum 3
bra03018 RNA degradation 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04142 Lysosome 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 5
mtr00562 Inositol phosphate metabolism 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04144 Endocytosis 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04148 Efferocytosis 2
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi00310 Lysine degradation 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit03040 Spliceosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 4
nta04142 Lysosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04148 Efferocytosis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824714 100802718 100806345 101259755 4326400 100383432 103841454 100251289 7458139 11433764 123081006 123072849 123445704 107904127 107897306 106415706 106396408 8068578 102601904 102624526 100831932 107803266 107831473
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