ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123078792	violaxanthin de-epoxidase, chloroplastic
tae-r.2	123061692	violaxanthin de-epoxidase, chloroplastic
tae-r.2	123070342	violaxanthin de-epoxidase, chloroplastic
hvu-r.1	123444277	violaxanthin de-epoxidase, chloroplastic
bdi-r.1	100823768	uncharacterized LOC100823768
osa-u.5	4325583	uncharacterized LOC4325583
zma-u.5	100381876	violaxanthin de-epoxidase3
sbi-r.1	8069798	violaxanthin de-epoxidase, chloroplastic
ath-u.5	AT2G21860	violaxanthin de-epoxidase-like protein
gma-u.5	100812383	uncharacterized LOC100812383
sly-u.5	101260129	uncharacterized LOC101260129
bra-r.6	103864298	uncharacterized LOC103864298
vvi-u.5	100259321	uncharacterized LOC100259321
ppo-u.5	7477136	violaxanthin de-epoxidase, chloroplastic
mtr-u.5	11427448	violaxanthin de-epoxidase, chloroplastic
ghi-r.1	121210213	violaxanthin de-epoxidase, chloroplastic
ghi-r.1	107950602	uncharacterized LOC107950602
bna-r.1	BNACNNG13890D	uncharacterized BNACNNG13890D
bna-r.1	106420766	uncharacterized LOC106420766
sot-r.1	102595436	uncharacterized LOC102595436
sot-r.1	102606421	uncharacterized LOC102606421
cit-r.1	102626038	uncharacterized LOC102626038
nta-r.1	107788911	violaxanthin de-epoxidase, chloroplastic-like
nta-r.1	107800328	violaxanthin de-epoxidase, chloroplastic-like
cre-r.1	CHLRE_09g388060v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0010028 [list] [network] xanthophyll cycle

(6 genes)

IEA

GO CC

GO MF

GO:0046422 [list] [network] violaxanthin de-epoxidase activity

(6 genes)

IEA

Protein

XP_044357335.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, cyto 1, mito 1

(predict for XP_044357335.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_044357335.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123078792	tae-r.2 for 123061692	tae-r.2 for 123070342	hvu-r.1 for 123444277	bdi-r.1 for 100823768	osa-u.5 for 4325583	zma-u.5 for 100381876	sbi-r.1 for 8069798	ath-u.5 for AT2G21860	gma-u.5 for 100812383	sly-u.5 for 101260129	bra-r.6 for 103864298	vvi-u.5 for 100259321	ppo-u.5 for 7477136	mtr-u.5 for 11427448	ghi-r.1 for 121210213	ghi-r.1 for 107950602	bna-r.1 for BNACNNG13890D	bna-r.1 for 106420766	sot-r.1 for 102595436	sot-r.1 for 102606421	cit-r.1 for 102626038	nta-r.1 for 107788911	nta-r.1 for 107800328	cre-r.1 for CHLRE_09g388060v5

Ortholog

Ortholog ID: 9992

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

violaxanthin de-epoxidase, chloroplastic

uncharacterized LOC100823768

uncharacterized LOC4325583

violaxanthin de-epoxidase3

violaxanthin de-epoxidase, chloroplastic

violaxanthin de-epoxidase-like protein

uncharacterized LOC100812383

uncharacterized LOC101260129

uncharacterized LOC103864298

uncharacterized LOC100259321

violaxanthin de-epoxidase, chloroplastic

uncharacterized LOC107950602

uncharacterized BNACNNG13890D

uncharacterized LOC106420766

uncharacterized LOC102595436

uncharacterized LOC102606421

uncharacterized LOC102626038

violaxanthin de-epoxidase, chloroplastic-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	6
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa04141	Protein processing in endoplasmic reticulum	3
osa04144	Endocytosis	2
osa04626	Plant-pathogen interaction	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00230	Purine metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

123078792

123061692

123070342

123444277

100823768

4325583

100381876

8069798

816722

100812383

101260129

103864298

100259321

7477136

11427448

121210213

107950602

106376934

106420766

102595436

102606421

102626038

107788911

107800328

5720579

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123078792 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078792 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	1	1	1	1	1	1	1	1	1	2	2	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123078792 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078792 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**