ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123080711	pyridoxal phosphate homeostasis protein
tae-r.2	123112680	pyridoxal phosphate homeostasis protein
tae-r.2	123180509	pyridoxal phosphate homeostasis protein
tae-r.2	123191234	pyridoxal phosphate homeostasis protein
hvu-r.1	123425414	pyridoxal phosphate homeostasis protein-like
hvu-r.1	123445499	pyridoxal phosphate homeostasis protein-like
bdi-r.1	100822956	pyridoxal phosphate homeostasis protein
bdi-r.1	100833669	pyridoxal phosphate homeostasis protein
osa-u.5	4337823	uncharacterized LOC4337823
osa-u.5	4325770	uncharacterized LOC4325770
zma-u.5	100191932	uncharacterized LOC100191932
zma-u.5	100286142	pyridoxal phosphate enzyme
sbi-r.1	8062328	proline synthase co-transcribed bacterial homolog protein
sbi-r.1	8075982	proline synthase co-transcribed bacterial homolog protein
ath-u.5	AT4G26860	Putative pyridoxal phosphate-dependent enzyme, YBL036C type
ath-u.5	AT1G11930	Putative pyridoxal phosphate-dependent enzyme, YBL036C type
gma-u.5	100527295	uncharacterized LOC100527295
gma-u.5	100793309	pyridoxal phosphate homeostasis protein
gma-u.5	121174069	pyridoxal phosphate homeostasis protein
sly-u.5	101247388	uncharacterized LOC101247388
sly-u.5	101263166	uncharacterized LOC101263166
bra-r.6	103866682	pyridoxal phosphate homeostasis protein
bra-r.6	103836198	pyridoxal phosphate homeostasis protein
vvi-u.5	100255429	uncharacterized LOC100255429
vvi-u.5	100245299	uncharacterized LOC100245299
ppo-u.5	18097341	uncharacterized LOC18097341
mtr-u.5	25488993	pyridoxal phosphate homeostasis protein
mtr-u.5	25486214	pyridoxal phosphate homeostasis protein
ghi-r.1	107932740	pyridoxal phosphate homeostasis protein
ghi-r.1	107910042	pyridoxal phosphate homeostasis protein
ghi-r.1	107903462	pyridoxal phosphate homeostasis protein
bna-r.1	106375688	pyridoxal phosphate homeostasis protein-like
bna-r.1	106445472	pyridoxal phosphate homeostasis protein
bna-r.1	106382410	pyridoxal phosphate homeostasis protein-like
sot-r.1	102594461	proline synthase co-transcribed bacterial homolog protein-like
sot-r.1	102605962	proline synthase co-transcribed bacterial homolog protein
cit-r.1	102618793	uncharacterized LOC102618793
cit-r.1	102620599	uncharacterized LOC102620599
nta-r.1	107805770	uncharacterized LOC107805770
nta-r.1	107769965	uncharacterized LOC107769965
nta-r.1	107761802	uncharacterized LOC107761802
cre-r.1	CHLRE_01g010848v5	uncharacterized protein

Top 50 coexpressed genes to 123080711 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123080711 (tae-r.2 coexpression data)

CoexMap"123080711"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005622 [list] [network] intracellular anatomical structure

(22726 genes)

IEA

GO MF

GO:0030170 [list] [network] pyridoxal phosphate binding

(321 genes)

IEA

Protein

XP_044359582.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 4

(predict for XP_044359582.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_044359582.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123080711	tae-r.2 for 123112680	tae-r.2 for 123180509	tae-r.2 for 123191234	hvu-r.1 for 123425414	hvu-r.1 for 123445499	bdi-r.1 for 100822956	bdi-r.1 for 100833669	osa-u.5 for 4337823	osa-u.5 for 4325770	zma-u.5 for 100191932	zma-u.5 for 100286142	sbi-r.1 for 8062328	sbi-r.1 for 8075982	ath-u.5 for AT4G26860	ath-u.5 for AT1G11930	gma-u.5 for 100527295	gma-u.5 for 100793309	gma-u.5 for 121174069	sly-u.5 for 101247388	sly-u.5 for 101263166	bra-r.6 for 103866682	bra-r.6 for 103836198	vvi-u.5 for 100255429	vvi-u.5 for 100245299	ppo-u.5 for 18097341	mtr-u.5 for 25488993	mtr-u.5 for 25486214	ghi-r.1 for 107932740	ghi-r.1 for 107910042	ghi-r.1 for 107903462	bna-r.1 for 106375688	bna-r.1 for 106445472	bna-r.1 for 106382410	sot-r.1 for 102594461	sot-r.1 for 102605962	cit-r.1 for 102618793	cit-r.1 for 102620599	nta-r.1 for 107805770	nta-r.1 for 107769965	nta-r.1 for 107761802	cre-r.1 for CHLRE_01g010848v5

Ortholog

Ortholog ID: 4113

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

pyridoxal phosphate homeostasis protein

pyridoxal phosphate homeostasis protein-like

pyridoxal phosphate homeostasis protein

uncharacterized LOC4337823

uncharacterized LOC4325770

uncharacterized LOC100191932

pyridoxal phosphate enzyme

proline synthase co-transcribed bacterial homolog protein

Putative pyridoxal phosphate-dependent enzyme, YBL036C type

uncharacterized LOC100527295

pyridoxal phosphate homeostasis protein

uncharacterized LOC101247388

uncharacterized LOC101263166

pyridoxal phosphate homeostasis protein

uncharacterized LOC100255429

uncharacterized LOC100245299

uncharacterized LOC18097341

pyridoxal phosphate homeostasis protein

pyridoxal phosphate homeostasis protein-like

proline synthase co-transcribed bacterial homolog protein-like

proline synthase co-transcribed bacterial homolog protein

uncharacterized LOC102618793

uncharacterized LOC102620599

uncharacterized LOC107805770

uncharacterized LOC107769965

uncharacterized LOC107761802

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5
tae00630	Glyoxylate and dicarboxylate metabolism	4
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	4
tae01232	Nucleotide metabolism	4
tae03013	Nucleocytoplasmic transport	3
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04517	IgSF CAM signaling	3
tae04814	Motor proteins	3
tae00230	Purine metabolism	2
tae01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	2
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	4
zma00280	Valine, leucine and isoleucine degradation	2
zma00410	beta-Alanine metabolism	2
zma00640	Propanoate metabolism	2
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath00480	Glutathione metabolism	2
ath01230	Biosynthesis of amino acids	2
ath04146	Peroxisome	2
ath00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma00270	Cysteine and methionine metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2
sly04141	Protein processing in endoplasmic reticulum	2
sly03018	RNA degradation	2
sly04626	Plant-pathogen interaction	2
sly03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra00710	Carbon fixation by Calvin cycle	4
bra01200	Carbon metabolism	4
bra00010	Glycolysis / Gluconeogenesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00630	Glyoxylate and dicarboxylate metabolism	5
ppo01200	Carbon metabolism	5
ppo00260	Glycine, serine and threonine metabolism	3
ppo00710	Carbon fixation by Calvin cycle	3
ppo01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	5
mtr01230	Biosynthesis of amino acids	2
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	5
ghi00190	Oxidative phosphorylation	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	5
ghi00190	Oxidative phosphorylation	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	6
bna00040	Pentose and glucuronate interconversions	2
bna00740	Riboflavin metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5
bna00330	Arginine and proline metabolism	2
bna00270	Cysteine and methionine metabolism	2
bna00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5
bna00270	Cysteine and methionine metabolism	2
bna00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot03013	Nucleocytoplasmic transport	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	5
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta04141	Protein processing in endoplasmic reticulum	3
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

123080711

123180509

123191234

123425414

123445499

100822956

100833669

4337823

4325770

100191932

100286142

8062328

8075982

828793

837744

100527295

100793309

121174069

101247388

101263166

103866682

103836198

100255429

100245299

18097341

25488993

25486214

107932740

107910042

107962011

106375688

106382410

106362178

102594461

102605962

102618793

102620599

107805770

107769965

107761802

5715016

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	2	2	2	3	2	2	2	1	2	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123080711 (tae-r.2 coexpression data)

Top 50 enrichment test to 123080711 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**