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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123080809   probable gamma-secretase subunit PEN-2 
 osa-u.5   4325239   probable gamma-secretase subunit PEN-2 
 zma-u.5   100277447   putative gamma-secretase subunit PEN-2 
 ath-u.5   AT5G09310   gamma-secretase subunit 
 gma-u.5   106798930   probable gamma-secretase subunit PEN-2 
 gma-u.5   102665782   probable gamma-secretase subunit PEN-2 
 sly-u.5   101265441   probable gamma-secretase subunit PEN-2 
 vvi-u.5   104879178   probable gamma-secretase subunit PEN-2 
 ppo-u.5   7466840   probable gamma-secretase subunit PEN-2 
 mtr-u.5   11434074   probable gamma-secretase subunit PEN-2 

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Top 50 coexpressed genes to 123080809 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123080809 (tae-r.2 coexpression data)

CoexMap"123080809"


taeLOC123080809 | Entrez gene ID : 123080809    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0070765 [list] [network] gamma-secretase complex  (9 genes)  IEA  
GO MF
Protein XP_044359698.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 4,  E.R. 1,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_044359698.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_044359698.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123080809

.
osa-u.5
for
4325239

.
zma-u.5
for
100277447

.
ath-u.5
for
AT5G09310

.
gma-u.5
for
106798930

.
gma-u.5
for
102665782

.
sly-u.5
for
101265441

.
vvi-u.5
for
104879178

.
ppo-u.5
for
7466840

.
mtr-u.5
for
11434074

.


Ortholog ID: 9082
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G09310 LOC102665782 LOC106798930 LOC101265441 LOC4325239 LOC100277447 LOC103847199 LOC103855816 LOC104879178 LOC7466840 LOC11434074 LOC123080809 LOC123072623 LOC123445582 LOC107935803 LOC107959616 LOC106384943 LOC106443085 CHLRE_07g323050v5 LOC8077391 LOC102597383 LOC102609683 LOC100821291 LOC107810466 LOC107826899
Function* gamma-secretase subunit probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 uncharacterized protein probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 probable gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2 putative gamma-secretase subunit PEN-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma03050 Proteasome 6
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma03050 Proteasome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04142 Lysosome 3
vvi04145 Phagosome 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04142 Lysosome 5
tae04145 Phagosome 5
tae03082 ATP-dependent chromatin remodeling 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu00190 Oxidative phosphorylation 2
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00270 Cysteine and methionine metabolism 2
ghi00543 Exopolysaccharide biosynthesis 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
bna03040 Spliceosome 4
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna04141 Protein processing in endoplasmic reticulum 7
bna03083 Polycomb repressive complex 6
bna03040 Spliceosome 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03020 RNA polymerase 2
sbi03022 Basal transcription factors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot00190 Oxidative phosphorylation 3
sot04145 Phagosome 3
sot04141 Protein processing in endoplasmic reticulum 3
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830790 102665782 106798930 101265441 4325239 100277447 103847199 103855816 104879178 7466840 11434074 123080809 123072623 123445582 107935803 107959616 106384943 106443085 5726417 8077391 102597383 102609683 100821291 107810466 107826899
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